Gene : Bradi3g36760 B. distachyon v3.1
Defline:  (1 of 2) PTHR21649//PTHR21649:SF4 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  4501
Name:  ? Bradi3g36760 Secondary Identifier:  ? PAC:32813252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g36760 0.5kb upstream 0.5kb upstream 1906 true Bd3: 38884880-38886785 Brachypodium distachyon
Bradi3g36760 0.5kb upstream 0.5kb upstream 500 false Bd3: 38886286-38886785 Brachypodium distachyon
Bradi3g36760 0.5kb downstream 0.5kb downstream 1906 true Bd3: 38884380-38886285 Brachypodium distachyon
Bradi3g36760 0.5kb downstream 0.5kb downstream 500 false Bd3: 38884380-38884879 Brachypodium distachyon
Bradi3g36760 1.0kb upstream 1.0kb upstream 2406 true Bd3: 38884880-38887285 Brachypodium distachyon
Bradi3g36760 1.0kb upstream 1.0kb upstream 1000 false Bd3: 38886286-38887285 Brachypodium distachyon
Bradi3g36760 1.0kb downstream 1.0kb downstream 2406 true Bd3: 38883880-38886285 Brachypodium distachyon
Bradi3g36760 1.0kb downstream 1.0kb downstream 1000 false Bd3: 38883880-38884879 Brachypodium distachyon
Bradi3g36760 2.0kb upstream 2.0kb upstream 3406 true Bd3: 38884880-38888285 Brachypodium distachyon
Bradi3g36760 2.0kb upstream 2.0kb upstream 2000 false Bd3: 38886286-38888285 Brachypodium distachyon
Bradi3g36760 2.0kb downstream 2.0kb downstream 3406 true Bd3: 38882880-38886285 Brachypodium distachyon
Bradi3g36760 2.0kb downstream 2.0kb downstream 2000 false Bd3: 38882880-38884879 Brachypodium distachyon
Bradi3g36760 5.0kb upstream 5.0kb upstream 6406 true Bd3: 38884880-38891285 Brachypodium distachyon
Bradi3g36760 5.0kb upstream 5.0kb upstream 5000 false Bd3: 38886286-38891285 Brachypodium distachyon
Bradi3g36760 5.0kb downstream 5.0kb downstream 6406 true Bd3: 38879880-38886285 Brachypodium distachyon
Bradi3g36760 5.0kb downstream 5.0kb downstream 5000 false Bd3: 38879880-38884879 Brachypodium distachyon
Bradi3g36760 10.0kb upstream 10.0kb upstream 11406 true Bd3: 38884880-38896285 Brachypodium distachyon
Bradi3g36760 10.0kb upstream 10.0kb upstream 10000 false Bd3: 38886286-38896285 Brachypodium distachyon
Bradi3g36760 10.0kb downstream 10.0kb downstream 11406 true Bd3: 38874880-38886285 Brachypodium distachyon
Bradi3g36760 10.0kb downstream 10.0kb downstream 10000 false Bd3: 38874880-38884879 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588622 5269 Grass View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 488.764     High  
cufflinks 545.084     High  
cufflinks 62.233     High Low
cufflinks 327.642     High  
cufflinks 763.668     High  
cufflinks 973.919     High  
cufflinks 985.659     High  
cufflinks 902.607     High  
cufflinks 1000.959     High  
cufflinks 832.07     High  
cufflinks 1232.418     High  
cufflinks 652.407     High  
cufflinks 1528.977     High High
cufflinks 1800.491     High High
cufflinks 731.534     High  
cufflinks 827.958     High  
cufflinks 1020.121     High  
cufflinks 6.112       Low
cufflinks 307.532     High  
cufflinks 261.818     High  
cufflinks 581.903     High  
cufflinks 500.447     High  
cufflinks 845.205     High  
cufflinks 978.572     High  
cufflinks 992.671     High  
cufflinks 59.785     High Low
cufflinks 1609.014     High High
cufflinks 112.173     High Low
cufflinks 286.835     High  
cufflinks 281.932     High  

0 Strain