Gene : Bradi3g36797 B. distachyon v3.1
Defline:  (1 of 16) PF07714//PF08263//PF13855 - Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  4507
Name:  ? Bradi3g36797 Secondary Identifier:  ? PAC:32815501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g36797 0.5kb upstream 0.5kb upstream 6139 true Bd3: 38921286-38927424 Brachypodium distachyon
Bradi3g36797 0.5kb upstream 0.5kb upstream 500 false Bd3: 38926925-38927424 Brachypodium distachyon
Bradi3g36797 0.5kb downstream 0.5kb downstream 6139 true Bd3: 38920786-38926924 Brachypodium distachyon
Bradi3g36797 0.5kb downstream 0.5kb downstream 500 false Bd3: 38920786-38921285 Brachypodium distachyon
Bradi3g36797 1.0kb upstream 1.0kb upstream 6639 true Bd3: 38921286-38927924 Brachypodium distachyon
Bradi3g36797 1.0kb upstream 1.0kb upstream 1000 false Bd3: 38926925-38927924 Brachypodium distachyon
Bradi3g36797 1.0kb downstream 1.0kb downstream 6639 true Bd3: 38920286-38926924 Brachypodium distachyon
Bradi3g36797 1.0kb downstream 1.0kb downstream 1000 false Bd3: 38920286-38921285 Brachypodium distachyon
Bradi3g36797 2.0kb upstream 2.0kb upstream 7639 true Bd3: 38921286-38928924 Brachypodium distachyon
Bradi3g36797 2.0kb upstream 2.0kb upstream 2000 false Bd3: 38926925-38928924 Brachypodium distachyon
Bradi3g36797 2.0kb downstream 2.0kb downstream 7639 true Bd3: 38919286-38926924 Brachypodium distachyon
Bradi3g36797 2.0kb downstream 2.0kb downstream 2000 false Bd3: 38919286-38921285 Brachypodium distachyon
Bradi3g36797 5.0kb upstream 5.0kb upstream 10639 true Bd3: 38921286-38931924 Brachypodium distachyon
Bradi3g36797 5.0kb upstream 5.0kb upstream 5000 false Bd3: 38926925-38931924 Brachypodium distachyon
Bradi3g36797 5.0kb downstream 5.0kb downstream 10639 true Bd3: 38916286-38926924 Brachypodium distachyon
Bradi3g36797 5.0kb downstream 5.0kb downstream 5000 false Bd3: 38916286-38921285 Brachypodium distachyon
Bradi3g36797 10.0kb upstream 10.0kb upstream 15639 true Bd3: 38921286-38936924 Brachypodium distachyon
Bradi3g36797 10.0kb upstream 10.0kb upstream 10000 false Bd3: 38926925-38936924 Brachypodium distachyon
Bradi3g36797 10.0kb downstream 10.0kb downstream 15639 true Bd3: 38911286-38926924 Brachypodium distachyon
Bradi3g36797 10.0kb downstream 10.0kb downstream 10000 false Bd3: 38911286-38921285 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578964 5269 Grass View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.854        
cufflinks 1.146        
cufflinks 1.253        
cufflinks 1.191        
cufflinks 0.447        
cufflinks 1.082        
cufflinks 1.126        
cufflinks 0.9        
cufflinks 1.252        
cufflinks 1.105        
cufflinks 0.036     Low Low
cufflinks 0.682        
cufflinks 0.047     Low Low
cufflinks 0.023     Low Low
cufflinks 0.256        
cufflinks 1.232        
cufflinks 0.71        
cufflinks 1.935       High
cufflinks 0.754        
cufflinks 0.101     Low Low
cufflinks 0.659        
cufflinks 1.186        
cufflinks 0.93        
cufflinks 0.756        
cufflinks 1.065        
cufflinks 1.019        
cufflinks 0.097       Low
cufflinks 1.215        
cufflinks 1.13        
cufflinks 1.605        

0 Strain