Gene : Bradi3g36960 B. distachyon v3.1
Defline:  (1 of 1) PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE Genomic Order:  4526
Name:  ? Bradi3g36960 Secondary Identifier:  ? PAC:32815385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g36960 0.5kb upstream 0.5kb upstream 5048 true Bd3: 39046358-39051405 Brachypodium distachyon
Bradi3g36960 0.5kb upstream 0.5kb upstream 500 false Bd3: 39050906-39051405 Brachypodium distachyon
Bradi3g36960 0.5kb downstream 0.5kb downstream 5048 true Bd3: 39045858-39050905 Brachypodium distachyon
Bradi3g36960 0.5kb downstream 0.5kb downstream 500 false Bd3: 39045858-39046357 Brachypodium distachyon
Bradi3g36960 1.0kb upstream 1.0kb upstream 5548 true Bd3: 39046358-39051905 Brachypodium distachyon
Bradi3g36960 1.0kb upstream 1.0kb upstream 1000 false Bd3: 39050906-39051905 Brachypodium distachyon
Bradi3g36960 1.0kb downstream 1.0kb downstream 5548 true Bd3: 39045358-39050905 Brachypodium distachyon
Bradi3g36960 1.0kb downstream 1.0kb downstream 1000 false Bd3: 39045358-39046357 Brachypodium distachyon
Bradi3g36960 2.0kb upstream 2.0kb upstream 6548 true Bd3: 39046358-39052905 Brachypodium distachyon
Bradi3g36960 2.0kb upstream 2.0kb upstream 2000 false Bd3: 39050906-39052905 Brachypodium distachyon
Bradi3g36960 2.0kb downstream 2.0kb downstream 6548 true Bd3: 39044358-39050905 Brachypodium distachyon
Bradi3g36960 2.0kb downstream 2.0kb downstream 2000 false Bd3: 39044358-39046357 Brachypodium distachyon
Bradi3g36960 5.0kb upstream 5.0kb upstream 9548 true Bd3: 39046358-39055905 Brachypodium distachyon
Bradi3g36960 5.0kb upstream 5.0kb upstream 5000 false Bd3: 39050906-39055905 Brachypodium distachyon
Bradi3g36960 5.0kb downstream 5.0kb downstream 9548 true Bd3: 39041358-39050905 Brachypodium distachyon
Bradi3g36960 5.0kb downstream 5.0kb downstream 5000 false Bd3: 39041358-39046357 Brachypodium distachyon
Bradi3g36960 10.0kb upstream 10.0kb upstream 14548 true Bd3: 39046358-39060905 Brachypodium distachyon
Bradi3g36960 10.0kb upstream 10.0kb upstream 10000 false Bd3: 39050906-39060905 Brachypodium distachyon
Bradi3g36960 10.0kb downstream 10.0kb downstream 14548 true Bd3: 39036358-39050905 Brachypodium distachyon
Bradi3g36960 10.0kb downstream 10.0kb downstream 10000 false Bd3: 39036358-39046357 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571727 5269 Grass View MSA
122041531 5273 Angiosperm View MSA
121345225 5274 Embryophyte View MSA
123427620 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.193        
cufflinks 0.507        
cufflinks 0.474        
cufflinks 0.433        
cufflinks 0.096        
cufflinks 0.381        
cufflinks 0.417        
cufflinks 0.291        
cufflinks 0.325        
cufflinks 0.148        
cufflinks 0.084        
cufflinks 0.264        
cufflinks 0.052     Low Low
cufflinks 0.067       Low
cufflinks 0.096        
cufflinks 0.409        
cufflinks 0.212        
cufflinks 0.58       High
cufflinks 0.248        
cufflinks 0.062     Low Low
cufflinks 0.341        
cufflinks 0.335        
cufflinks 0.281        
cufflinks 0.32        
cufflinks 0.473        
cufflinks 0.353        
cufflinks 0.038     Low Low
cufflinks 0.226        
cufflinks 0.3        
cufflinks 0.507        

0 Strain