Gene : Bradi3g37152 B. distachyon v3.1
Defline:  (1 of 2) PTHR20978:SF0 - SPLICING FACTOR 3B SUBUNIT 5 Genomic Order:  4553
Name:  ? Bradi3g37152 Secondary Identifier:  ? PAC:32814271
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37152 0.5kb upstream 0.5kb upstream 1330 true Bd3: 39206481-39207810 Brachypodium distachyon
Bradi3g37152 0.5kb upstream 0.5kb upstream 500 false Bd3: 39207311-39207810 Brachypodium distachyon
Bradi3g37152 0.5kb downstream 0.5kb downstream 1330 true Bd3: 39205981-39207310 Brachypodium distachyon
Bradi3g37152 0.5kb downstream 0.5kb downstream 500 false Bd3: 39205981-39206480 Brachypodium distachyon
Bradi3g37152 1.0kb upstream 1.0kb upstream 1830 true Bd3: 39206481-39208310 Brachypodium distachyon
Bradi3g37152 1.0kb upstream 1.0kb upstream 1000 false Bd3: 39207311-39208310 Brachypodium distachyon
Bradi3g37152 1.0kb downstream 1.0kb downstream 1830 true Bd3: 39205481-39207310 Brachypodium distachyon
Bradi3g37152 1.0kb downstream 1.0kb downstream 1000 false Bd3: 39205481-39206480 Brachypodium distachyon
Bradi3g37152 2.0kb upstream 2.0kb upstream 2830 true Bd3: 39206481-39209310 Brachypodium distachyon
Bradi3g37152 2.0kb upstream 2.0kb upstream 2000 false Bd3: 39207311-39209310 Brachypodium distachyon
Bradi3g37152 2.0kb downstream 2.0kb downstream 2830 true Bd3: 39204481-39207310 Brachypodium distachyon
Bradi3g37152 2.0kb downstream 2.0kb downstream 2000 false Bd3: 39204481-39206480 Brachypodium distachyon
Bradi3g37152 5.0kb upstream 5.0kb upstream 5830 true Bd3: 39206481-39212310 Brachypodium distachyon
Bradi3g37152 5.0kb upstream 5.0kb upstream 5000 false Bd3: 39207311-39212310 Brachypodium distachyon
Bradi3g37152 5.0kb downstream 5.0kb downstream 5830 true Bd3: 39201481-39207310 Brachypodium distachyon
Bradi3g37152 5.0kb downstream 5.0kb downstream 5000 false Bd3: 39201481-39206480 Brachypodium distachyon
Bradi3g37152 10.0kb upstream 10.0kb upstream 10830 true Bd3: 39206481-39217310 Brachypodium distachyon
Bradi3g37152 10.0kb upstream 10.0kb upstream 10000 false Bd3: 39207311-39217310 Brachypodium distachyon
Bradi3g37152 10.0kb downstream 10.0kb downstream 10830 true Bd3: 39196481-39207310 Brachypodium distachyon
Bradi3g37152 10.0kb downstream 10.0kb downstream 10000 false Bd3: 39196481-39206480 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
124568219 5269 Grass View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain