Gene : Bradi3g37110 B. distachyon v3.1

Defline:  (1 of 1) PTHR11782//PTHR11782:SF42 - ADENOSINE/GUANOSINE DIPHOSPHATASE // APYRASE 3-RELATED Genomic Order:  4546
Name:  ? Bradi3g37110 Secondary Identifier:  ? PAC:32812545

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7184 Brachypodium distachyon pathologic  
Bdistachyon PWY-7210 Brachypodium distachyon pathologic  
Bdistachyon PWY-7211 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37110 0.5kb upstream 0.5kb upstream 4314 true Bd3: 39175452-39179765 Brachypodium distachyon
Bradi3g37110 0.5kb upstream 0.5kb upstream 500 false Bd3: 39179266-39179765 Brachypodium distachyon
Bradi3g37110 0.5kb downstream 0.5kb downstream 4314 true Bd3: 39174952-39179265 Brachypodium distachyon
Bradi3g37110 0.5kb downstream 0.5kb downstream 500 false Bd3: 39174952-39175451 Brachypodium distachyon
Bradi3g37110 1.0kb upstream 1.0kb upstream 4814 true Bd3: 39175452-39180265 Brachypodium distachyon
Bradi3g37110 1.0kb upstream 1.0kb upstream 1000 false Bd3: 39179266-39180265 Brachypodium distachyon
Bradi3g37110 1.0kb downstream 1.0kb downstream 4814 true Bd3: 39174452-39179265 Brachypodium distachyon
Bradi3g37110 1.0kb downstream 1.0kb downstream 1000 false Bd3: 39174452-39175451 Brachypodium distachyon
Bradi3g37110 2.0kb upstream 2.0kb upstream 5814 true Bd3: 39175452-39181265 Brachypodium distachyon
Bradi3g37110 2.0kb upstream 2.0kb upstream 2000 false Bd3: 39179266-39181265 Brachypodium distachyon
Bradi3g37110 2.0kb downstream 2.0kb downstream 5814 true Bd3: 39173452-39179265 Brachypodium distachyon
Bradi3g37110 2.0kb downstream 2.0kb downstream 2000 false Bd3: 39173452-39175451 Brachypodium distachyon
Bradi3g37110 5.0kb upstream 5.0kb upstream 8814 true Bd3: 39175452-39184265 Brachypodium distachyon
Bradi3g37110 5.0kb upstream 5.0kb upstream 5000 false Bd3: 39179266-39184265 Brachypodium distachyon
Bradi3g37110 5.0kb downstream 5.0kb downstream 8814 true Bd3: 39170452-39179265 Brachypodium distachyon
Bradi3g37110 5.0kb downstream 5.0kb downstream 5000 false Bd3: 39170452-39175451 Brachypodium distachyon
Bradi3g37110 10.0kb upstream 10.0kb upstream 13814 true Bd3: 39175452-39189265 Brachypodium distachyon
Bradi3g37110 10.0kb upstream 10.0kb upstream 10000 false Bd3: 39179266-39189265 Brachypodium distachyon
Bradi3g37110 10.0kb downstream 10.0kb downstream 13814 true Bd3: 39165452-39179265 Brachypodium distachyon
Bradi3g37110 10.0kb downstream 10.0kb downstream 10000 false Bd3: 39165452-39175451 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041352 5273 Angiosperm View MSA
124571247 5269 Grass View MSA
121344966 5274 Embryophyte View MSA
123426899 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.597       Low
cufflinks 3.884        
cufflinks 4.429        
cufflinks 3.874        
cufflinks 4.682        
cufflinks 4.134        
cufflinks 4.004        
cufflinks 4.379        
cufflinks 4.725        
cufflinks 5.974       High
cufflinks 5.361        
cufflinks 4.188        
cufflinks 4.837        
cufflinks 4.976        
cufflinks 3.577       Low
cufflinks 3.785        
cufflinks 3.63       Low
cufflinks 5.665        
cufflinks 6.786       High
cufflinks 7.386       High
cufflinks 6.758       High
cufflinks 5.293        
cufflinks 5.138        
cufflinks 4.404        
cufflinks 4.414        
cufflinks 5.182        
cufflinks 5.823        
cufflinks 5.088        
cufflinks 4.972        
cufflinks 5.115        

0 Strain