Gene : Bradi3g37530 B. distachyon v3.1
Defline:  (1 of 1) PTHR11972//PTHR11972:SF44 - NADPH OXIDASE // RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E Genomic Order:  4611
Name:  ? Bradi3g37530 Secondary Identifier:  ? PAC:32816299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37530 0.5kb upstream 0.5kb upstream 7870 true Bd3: 39777167-39785036 Brachypodium distachyon
Bradi3g37530 0.5kb upstream 0.5kb upstream 500 false Bd3: 39777167-39777666 Brachypodium distachyon
Bradi3g37530 0.5kb downstream 0.5kb downstream 7870 true Bd3: 39777667-39785536 Brachypodium distachyon
Bradi3g37530 0.5kb downstream 0.5kb downstream 500 false Bd3: 39785037-39785536 Brachypodium distachyon
Bradi3g37530 1.0kb upstream 1.0kb upstream 8370 true Bd3: 39776667-39785036 Brachypodium distachyon
Bradi3g37530 1.0kb upstream 1.0kb upstream 1000 false Bd3: 39776667-39777666 Brachypodium distachyon
Bradi3g37530 1.0kb downstream 1.0kb downstream 8370 true Bd3: 39777667-39786036 Brachypodium distachyon
Bradi3g37530 1.0kb downstream 1.0kb downstream 1000 false Bd3: 39785037-39786036 Brachypodium distachyon
Bradi3g37530 2.0kb upstream 2.0kb upstream 9370 true Bd3: 39775667-39785036 Brachypodium distachyon
Bradi3g37530 2.0kb upstream 2.0kb upstream 2000 false Bd3: 39775667-39777666 Brachypodium distachyon
Bradi3g37530 2.0kb downstream 2.0kb downstream 9370 true Bd3: 39777667-39787036 Brachypodium distachyon
Bradi3g37530 2.0kb downstream 2.0kb downstream 2000 false Bd3: 39785037-39787036 Brachypodium distachyon
Bradi3g37530 5.0kb upstream 5.0kb upstream 12370 true Bd3: 39772667-39785036 Brachypodium distachyon
Bradi3g37530 5.0kb upstream 5.0kb upstream 5000 false Bd3: 39772667-39777666 Brachypodium distachyon
Bradi3g37530 5.0kb downstream 5.0kb downstream 12370 true Bd3: 39777667-39790036 Brachypodium distachyon
Bradi3g37530 5.0kb downstream 5.0kb downstream 5000 false Bd3: 39785037-39790036 Brachypodium distachyon
Bradi3g37530 10.0kb upstream 10.0kb upstream 17370 true Bd3: 39767667-39785036 Brachypodium distachyon
Bradi3g37530 10.0kb upstream 10.0kb upstream 10000 false Bd3: 39767667-39777666 Brachypodium distachyon
Bradi3g37530 10.0kb downstream 10.0kb downstream 17370 true Bd3: 39777667-39795036 Brachypodium distachyon
Bradi3g37530 10.0kb downstream 10.0kb downstream 10000 false Bd3: 39785037-39795036 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586507 5269 Grass View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.293        
cufflinks 2.34        
cufflinks 2.838        
cufflinks 2.414        
cufflinks 1.364       Low
cufflinks 2.66        
cufflinks 2.429        
cufflinks 3.826        
cufflinks 3.248        
cufflinks 3.123        
cufflinks 1.727        
cufflinks 2.821        
cufflinks 2.863        
cufflinks 1.702        
cufflinks 3.113        
cufflinks 2.272        
cufflinks 2.135        
cufflinks 4.871       High
cufflinks 1.597        
cufflinks 0.493       Low
cufflinks 3.912        
cufflinks 3.136        
cufflinks 3.565        
cufflinks 3.077        
cufflinks 2.311        
cufflinks 3.116        
cufflinks 2.569        
cufflinks 2.687        
cufflinks 2.794        
cufflinks 3.572        

0 Strain