Gene : Bradi3g37590 B. distachyon v3.1
Defline:  (1 of 2) PF06172 - Cupin superfamily (DUF985) (Cupin_5) Genomic Order:  4618
Name:  ? Bradi3g37590 Secondary Identifier:  ? PAC:32812662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37590 0.5kb upstream 0.5kb upstream 3216 true Bd3: 39839814-39843029 Brachypodium distachyon
Bradi3g37590 0.5kb upstream 0.5kb upstream 500 false Bd3: 39839814-39840313 Brachypodium distachyon
Bradi3g37590 0.5kb downstream 0.5kb downstream 3216 true Bd3: 39840314-39843529 Brachypodium distachyon
Bradi3g37590 0.5kb downstream 0.5kb downstream 500 false Bd3: 39843030-39843529 Brachypodium distachyon
Bradi3g37590 1.0kb upstream 1.0kb upstream 3716 true Bd3: 39839314-39843029 Brachypodium distachyon
Bradi3g37590 1.0kb upstream 1.0kb upstream 1000 false Bd3: 39839314-39840313 Brachypodium distachyon
Bradi3g37590 1.0kb downstream 1.0kb downstream 3716 true Bd3: 39840314-39844029 Brachypodium distachyon
Bradi3g37590 1.0kb downstream 1.0kb downstream 1000 false Bd3: 39843030-39844029 Brachypodium distachyon
Bradi3g37590 2.0kb upstream 2.0kb upstream 4716 true Bd3: 39838314-39843029 Brachypodium distachyon
Bradi3g37590 2.0kb upstream 2.0kb upstream 2000 false Bd3: 39838314-39840313 Brachypodium distachyon
Bradi3g37590 2.0kb downstream 2.0kb downstream 4716 true Bd3: 39840314-39845029 Brachypodium distachyon
Bradi3g37590 2.0kb downstream 2.0kb downstream 2000 false Bd3: 39843030-39845029 Brachypodium distachyon
Bradi3g37590 5.0kb upstream 5.0kb upstream 7716 true Bd3: 39835314-39843029 Brachypodium distachyon
Bradi3g37590 5.0kb upstream 5.0kb upstream 5000 false Bd3: 39835314-39840313 Brachypodium distachyon
Bradi3g37590 5.0kb downstream 5.0kb downstream 7716 true Bd3: 39840314-39848029 Brachypodium distachyon
Bradi3g37590 5.0kb downstream 5.0kb downstream 5000 false Bd3: 39843030-39848029 Brachypodium distachyon
Bradi3g37590 10.0kb upstream 10.0kb upstream 12716 true Bd3: 39830314-39843029 Brachypodium distachyon
Bradi3g37590 10.0kb upstream 10.0kb upstream 10000 false Bd3: 39830314-39840313 Brachypodium distachyon
Bradi3g37590 10.0kb downstream 10.0kb downstream 12716 true Bd3: 39840314-39853029 Brachypodium distachyon
Bradi3g37590 10.0kb downstream 10.0kb downstream 10000 false Bd3: 39843030-39853029 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579008 5269 Grass View MSA
122051010 5273 Angiosperm View MSA
121346638 5274 Embryophyte View MSA
123426052 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.468     High  
cufflinks 7.723        
cufflinks 8.091        
cufflinks 10.775     High  
cufflinks 14.492     High  
cufflinks 8.074        
cufflinks 7.421        
cufflinks 11.1     High  
cufflinks 9.537     High  
cufflinks 14.418     High  
cufflinks 6.332       Low
cufflinks 8.115        
cufflinks 4.564       Low
cufflinks 5.888       Low
cufflinks 10.523     High  
cufflinks 6.898       Low
cufflinks 14.779     High  
cufflinks 14.347     High  
cufflinks 17.453     High High
cufflinks 12.072     High  
cufflinks 26.585     High High
cufflinks 9.386        
cufflinks 10.961     High  
cufflinks 9.774     High  
cufflinks 9.365        
cufflinks 9.872        
cufflinks 9.367     High  
cufflinks 10.445        
cufflinks 10.637        
cufflinks 16.496     High High

0 Strain