Gene : Bradi3g43050 B. distachyon v3.1
Defline:  (1 of 2) K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A) Genomic Order:  5307
Name:  ? Bradi3g43050 Secondary Identifier:  ? PAC:32816740
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g43050 0.5kb upstream 0.5kb upstream 12993 true Bd3: 44125298-44138290 Brachypodium distachyon
Bradi3g43050 0.5kb upstream 0.5kb upstream 500 false Bd3: 44137791-44138290 Brachypodium distachyon
Bradi3g43050 0.5kb downstream 0.5kb downstream 12993 true Bd3: 44124798-44137790 Brachypodium distachyon
Bradi3g43050 0.5kb downstream 0.5kb downstream 500 false Bd3: 44124798-44125297 Brachypodium distachyon
Bradi3g43050 1.0kb upstream 1.0kb upstream 13493 true Bd3: 44125298-44138790 Brachypodium distachyon
Bradi3g43050 1.0kb upstream 1.0kb upstream 1000 false Bd3: 44137791-44138790 Brachypodium distachyon
Bradi3g43050 1.0kb downstream 1.0kb downstream 13493 true Bd3: 44124298-44137790 Brachypodium distachyon
Bradi3g43050 1.0kb downstream 1.0kb downstream 1000 false Bd3: 44124298-44125297 Brachypodium distachyon
Bradi3g43050 2.0kb upstream 2.0kb upstream 14493 true Bd3: 44125298-44139790 Brachypodium distachyon
Bradi3g43050 2.0kb upstream 2.0kb upstream 2000 false Bd3: 44137791-44139790 Brachypodium distachyon
Bradi3g43050 2.0kb downstream 2.0kb downstream 14493 true Bd3: 44123298-44137790 Brachypodium distachyon
Bradi3g43050 2.0kb downstream 2.0kb downstream 2000 false Bd3: 44123298-44125297 Brachypodium distachyon
Bradi3g43050 5.0kb upstream 5.0kb upstream 17493 true Bd3: 44125298-44142790 Brachypodium distachyon
Bradi3g43050 5.0kb upstream 5.0kb upstream 5000 false Bd3: 44137791-44142790 Brachypodium distachyon
Bradi3g43050 5.0kb downstream 5.0kb downstream 17493 true Bd3: 44120298-44137790 Brachypodium distachyon
Bradi3g43050 5.0kb downstream 5.0kb downstream 5000 false Bd3: 44120298-44125297 Brachypodium distachyon
Bradi3g43050 10.0kb upstream 10.0kb upstream 22493 true Bd3: 44125298-44147790 Brachypodium distachyon
Bradi3g43050 10.0kb upstream 10.0kb upstream 10000 false Bd3: 44137791-44147790 Brachypodium distachyon
Bradi3g43050 10.0kb downstream 10.0kb downstream 22493 true Bd3: 44115298-44137790 Brachypodium distachyon
Bradi3g43050 10.0kb downstream 10.0kb downstream 10000 false Bd3: 44115298-44125297 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041213 5273 Angiosperm View MSA
124575649 5269 Grass View MSA
121346672 5274 Embryophyte View MSA
123424215 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.636        
cufflinks 1.959        
cufflinks 2.44       High
cufflinks 1.4        
cufflinks 0.497       Low
cufflinks 1.587        
cufflinks 1.478        
cufflinks 1.194        
cufflinks 1.377        
cufflinks 0.991        
cufflinks 1.273        
cufflinks 1.478        
cufflinks 0.817        
cufflinks 0.764        
cufflinks 0.582       Low
cufflinks 1.526        
cufflinks 0.851        
cufflinks 2.461       High
cufflinks 1.678        
cufflinks 0.542       Low
cufflinks 1.1        
cufflinks 2.147       High
cufflinks 1.091        
cufflinks 1.03        
cufflinks 1.29        
cufflinks 2.233       High
cufflinks 0.999        
cufflinks 1.969        
cufflinks 1.926        
cufflinks 1.611        

0 Strain