Gene : Bradi3g43080 B. distachyon v3.1
Defline:  (1 of 60) PF03330 - Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  5310
Name:  ? Bradi3g43080 Secondary Identifier:  ? PAC:32816362
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g43080 0.5kb upstream 0.5kb upstream 1695 true Bd3: 44147539-44149233 Brachypodium distachyon
Bradi3g43080 0.5kb upstream 0.5kb upstream 500 false Bd3: 44147539-44148038 Brachypodium distachyon
Bradi3g43080 0.5kb downstream 0.5kb downstream 1695 true Bd3: 44148039-44149733 Brachypodium distachyon
Bradi3g43080 0.5kb downstream 0.5kb downstream 500 false Bd3: 44149234-44149733 Brachypodium distachyon
Bradi3g43080 1.0kb upstream 1.0kb upstream 2195 true Bd3: 44147039-44149233 Brachypodium distachyon
Bradi3g43080 1.0kb upstream 1.0kb upstream 1000 false Bd3: 44147039-44148038 Brachypodium distachyon
Bradi3g43080 1.0kb downstream 1.0kb downstream 2195 true Bd3: 44148039-44150233 Brachypodium distachyon
Bradi3g43080 1.0kb downstream 1.0kb downstream 1000 false Bd3: 44149234-44150233 Brachypodium distachyon
Bradi3g43080 2.0kb upstream 2.0kb upstream 3195 true Bd3: 44146039-44149233 Brachypodium distachyon
Bradi3g43080 2.0kb upstream 2.0kb upstream 2000 false Bd3: 44146039-44148038 Brachypodium distachyon
Bradi3g43080 2.0kb downstream 2.0kb downstream 3195 true Bd3: 44148039-44151233 Brachypodium distachyon
Bradi3g43080 2.0kb downstream 2.0kb downstream 2000 false Bd3: 44149234-44151233 Brachypodium distachyon
Bradi3g43080 5.0kb upstream 5.0kb upstream 6195 true Bd3: 44143039-44149233 Brachypodium distachyon
Bradi3g43080 5.0kb upstream 5.0kb upstream 5000 false Bd3: 44143039-44148038 Brachypodium distachyon
Bradi3g43080 5.0kb downstream 5.0kb downstream 6195 true Bd3: 44148039-44154233 Brachypodium distachyon
Bradi3g43080 5.0kb downstream 5.0kb downstream 5000 false Bd3: 44149234-44154233 Brachypodium distachyon
Bradi3g43080 10.0kb upstream 10.0kb upstream 11195 true Bd3: 44138039-44149233 Brachypodium distachyon
Bradi3g43080 10.0kb upstream 10.0kb upstream 10000 false Bd3: 44138039-44148038 Brachypodium distachyon
Bradi3g43080 10.0kb downstream 10.0kb downstream 11195 true Bd3: 44148039-44159233 Brachypodium distachyon
Bradi3g43080 10.0kb downstream 10.0kb downstream 10000 false Bd3: 44149234-44159233 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027787 5273 Angiosperm View MSA
124576310 5269 Grass View MSA
123429074 5275 Viridiplantae View MSA
121297395 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.025     Low  
cufflinks 0.171       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.24       High
cufflinks 0.065     Low  
cufflinks 0.031     Low  
cufflinks 0.018     Low Low
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.119     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.011     Low Low
cufflinks 0.021     Low  

0 Strain