Gene : Bradi3g43120 B. distachyon v3.1
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  5313
Name:  ? Bradi3g43120 Secondary Identifier:  ? PAC:32814003
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-2541 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g43120 0.5kb upstream 0.5kb upstream 7713 true Bd3: 44190809-44198521 Brachypodium distachyon
Bradi3g43120 0.5kb upstream 0.5kb upstream 500 false Bd3: 44190809-44191308 Brachypodium distachyon
Bradi3g43120 0.5kb downstream 0.5kb downstream 7713 true Bd3: 44191309-44199021 Brachypodium distachyon
Bradi3g43120 0.5kb downstream 0.5kb downstream 500 false Bd3: 44198522-44199021 Brachypodium distachyon
Bradi3g43120 1.0kb upstream 1.0kb upstream 8213 true Bd3: 44190309-44198521 Brachypodium distachyon
Bradi3g43120 1.0kb upstream 1.0kb upstream 1000 false Bd3: 44190309-44191308 Brachypodium distachyon
Bradi3g43120 1.0kb downstream 1.0kb downstream 8213 true Bd3: 44191309-44199521 Brachypodium distachyon
Bradi3g43120 1.0kb downstream 1.0kb downstream 1000 false Bd3: 44198522-44199521 Brachypodium distachyon
Bradi3g43120 2.0kb upstream 2.0kb upstream 9213 true Bd3: 44189309-44198521 Brachypodium distachyon
Bradi3g43120 2.0kb upstream 2.0kb upstream 2000 false Bd3: 44189309-44191308 Brachypodium distachyon
Bradi3g43120 2.0kb downstream 2.0kb downstream 9213 true Bd3: 44191309-44200521 Brachypodium distachyon
Bradi3g43120 2.0kb downstream 2.0kb downstream 2000 false Bd3: 44198522-44200521 Brachypodium distachyon
Bradi3g43120 5.0kb upstream 5.0kb upstream 12213 true Bd3: 44186309-44198521 Brachypodium distachyon
Bradi3g43120 5.0kb upstream 5.0kb upstream 5000 false Bd3: 44186309-44191308 Brachypodium distachyon
Bradi3g43120 5.0kb downstream 5.0kb downstream 12213 true Bd3: 44191309-44203521 Brachypodium distachyon
Bradi3g43120 5.0kb downstream 5.0kb downstream 5000 false Bd3: 44198522-44203521 Brachypodium distachyon
Bradi3g43120 10.0kb upstream 10.0kb upstream 17213 true Bd3: 44181309-44198521 Brachypodium distachyon
Bradi3g43120 10.0kb upstream 10.0kb upstream 10000 false Bd3: 44181309-44191308 Brachypodium distachyon
Bradi3g43120 10.0kb downstream 10.0kb downstream 17213 true Bd3: 44191309-44208521 Brachypodium distachyon
Bradi3g43120 10.0kb downstream 10.0kb downstream 10000 false Bd3: 44198522-44208521 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574487 5269 Grass View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.345        
cufflinks 7.691        
cufflinks 6.636        
cufflinks 7.451        
cufflinks 7.059        
cufflinks 8.609        
cufflinks 7.649        
cufflinks 7.331        
cufflinks 8.199        
cufflinks 6.241        
cufflinks 7.716        
cufflinks 7.348        
cufflinks 6.196        
cufflinks 6.848        
cufflinks 6.057       Low
cufflinks 8.03        
cufflinks 9.933        
cufflinks 13.866     High High
cufflinks 15.101     High High
cufflinks 10.15        
cufflinks 11.688     High High
cufflinks 7.01        
cufflinks 7.175        
cufflinks 8.377        
cufflinks 8.144        
cufflinks 7.29        
cufflinks 8.98     High  
cufflinks 6.601        
cufflinks 7.087        
cufflinks 9.5        

0 Strain