Gene : Bradi3g43360 B. distachyon v3.1
Defline:  (1 of 1) PTHR13832//PTHR13832:SF279 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED Genomic Order:  5349
Name:  ? Bradi3g43360 Secondary Identifier:  ? PAC:32821756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g43360 0.5kb upstream 0.5kb upstream 5306 true Bd3: 44568444-44573749 Brachypodium distachyon
Bradi3g43360 0.5kb upstream 0.5kb upstream 500 false Bd3: 44573250-44573749 Brachypodium distachyon
Bradi3g43360 0.5kb downstream 0.5kb downstream 5306 true Bd3: 44567944-44573249 Brachypodium distachyon
Bradi3g43360 0.5kb downstream 0.5kb downstream 500 false Bd3: 44567944-44568443 Brachypodium distachyon
Bradi3g43360 1.0kb upstream 1.0kb upstream 5806 true Bd3: 44568444-44574249 Brachypodium distachyon
Bradi3g43360 1.0kb upstream 1.0kb upstream 1000 false Bd3: 44573250-44574249 Brachypodium distachyon
Bradi3g43360 1.0kb downstream 1.0kb downstream 5806 true Bd3: 44567444-44573249 Brachypodium distachyon
Bradi3g43360 1.0kb downstream 1.0kb downstream 1000 false Bd3: 44567444-44568443 Brachypodium distachyon
Bradi3g43360 2.0kb upstream 2.0kb upstream 6806 true Bd3: 44568444-44575249 Brachypodium distachyon
Bradi3g43360 2.0kb upstream 2.0kb upstream 2000 false Bd3: 44573250-44575249 Brachypodium distachyon
Bradi3g43360 2.0kb downstream 2.0kb downstream 6806 true Bd3: 44566444-44573249 Brachypodium distachyon
Bradi3g43360 2.0kb downstream 2.0kb downstream 2000 false Bd3: 44566444-44568443 Brachypodium distachyon
Bradi3g43360 5.0kb upstream 5.0kb upstream 9806 true Bd3: 44568444-44578249 Brachypodium distachyon
Bradi3g43360 5.0kb upstream 5.0kb upstream 5000 false Bd3: 44573250-44578249 Brachypodium distachyon
Bradi3g43360 5.0kb downstream 5.0kb downstream 9806 true Bd3: 44563444-44573249 Brachypodium distachyon
Bradi3g43360 5.0kb downstream 5.0kb downstream 5000 false Bd3: 44563444-44568443 Brachypodium distachyon
Bradi3g43360 10.0kb upstream 10.0kb upstream 14806 true Bd3: 44568444-44583249 Brachypodium distachyon
Bradi3g43360 10.0kb upstream 10.0kb upstream 10000 false Bd3: 44573250-44583249 Brachypodium distachyon
Bradi3g43360 10.0kb downstream 10.0kb downstream 14806 true Bd3: 44558444-44573249 Brachypodium distachyon
Bradi3g43360 10.0kb downstream 10.0kb downstream 10000 false Bd3: 44558444-44568443 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579971 5269 Grass View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.016     High High
cufflinks 20.982     High  
cufflinks 39.283     High  
cufflinks 25.316     High  
cufflinks 150.77     High High
cufflinks 20.554     High Low
cufflinks 18.329     High Low
cufflinks 37.295     High  
cufflinks 24.724     High  
cufflinks 40.883     High  
cufflinks 28.779     High  
cufflinks 34.341     High  
cufflinks 31.012     High  
cufflinks 21.791     High  
cufflinks 80.41     High High
cufflinks 19.287     High Low
cufflinks 33.025     High  
cufflinks 49.176     High  
cufflinks 32.294     High  
cufflinks 58.983     High High
cufflinks 13.064     High Low
cufflinks 36.981     High  
cufflinks 36.081     High  
cufflinks 28.028     High  
cufflinks 22.474     High  
cufflinks 46.042     High  
cufflinks 21.903     High  
cufflinks 43.152     High  
cufflinks 39.739     High  
cufflinks 42.396     High  

0 Strain