Gene : Bradi4g31727 B. distachyon v3.1
Defline:  (1 of 1) PTHR30540//PTHR30540:SF5 - OSMOTIC STRESS POTASSIUM TRANSPORTER Genomic Order:  4081
Name:  ? Bradi4g31727 Secondary Identifier:  ? PAC:32789711
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g31727 0.5kb upstream 0.5kb upstream 5767 true Bd4: 37352393-37358159 Brachypodium distachyon
Bradi4g31727 0.5kb upstream 0.5kb upstream 500 false Bd4: 37352393-37352892 Brachypodium distachyon
Bradi4g31727 0.5kb downstream 0.5kb downstream 5767 true Bd4: 37352893-37358659 Brachypodium distachyon
Bradi4g31727 0.5kb downstream 0.5kb downstream 500 false Bd4: 37358160-37358659 Brachypodium distachyon
Bradi4g31727 1.0kb upstream 1.0kb upstream 6267 true Bd4: 37351893-37358159 Brachypodium distachyon
Bradi4g31727 1.0kb upstream 1.0kb upstream 1000 false Bd4: 37351893-37352892 Brachypodium distachyon
Bradi4g31727 1.0kb downstream 1.0kb downstream 6267 true Bd4: 37352893-37359159 Brachypodium distachyon
Bradi4g31727 1.0kb downstream 1.0kb downstream 1000 false Bd4: 37358160-37359159 Brachypodium distachyon
Bradi4g31727 2.0kb upstream 2.0kb upstream 7267 true Bd4: 37350893-37358159 Brachypodium distachyon
Bradi4g31727 2.0kb upstream 2.0kb upstream 2000 false Bd4: 37350893-37352892 Brachypodium distachyon
Bradi4g31727 2.0kb downstream 2.0kb downstream 7267 true Bd4: 37352893-37360159 Brachypodium distachyon
Bradi4g31727 2.0kb downstream 2.0kb downstream 2000 false Bd4: 37358160-37360159 Brachypodium distachyon
Bradi4g31727 5.0kb upstream 5.0kb upstream 10267 true Bd4: 37347893-37358159 Brachypodium distachyon
Bradi4g31727 5.0kb upstream 5.0kb upstream 5000 false Bd4: 37347893-37352892 Brachypodium distachyon
Bradi4g31727 5.0kb downstream 5.0kb downstream 10267 true Bd4: 37352893-37363159 Brachypodium distachyon
Bradi4g31727 5.0kb downstream 5.0kb downstream 5000 false Bd4: 37358160-37363159 Brachypodium distachyon
Bradi4g31727 10.0kb upstream 10.0kb upstream 15267 true Bd4: 37342893-37358159 Brachypodium distachyon
Bradi4g31727 10.0kb upstream 10.0kb upstream 10000 false Bd4: 37342893-37352892 Brachypodium distachyon
Bradi4g31727 10.0kb downstream 10.0kb downstream 15267 true Bd4: 37352893-37368159 Brachypodium distachyon
Bradi4g31727 10.0kb downstream 10.0kb downstream 10000 false Bd4: 37358160-37368159 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581469 5269 Grass View MSA
122049988 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121348736 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.322       High
cufflinks 0.307        
cufflinks 0.363        
cufflinks 0.28        
cufflinks 0.685        
cufflinks 0.253       Low
cufflinks 0.272        
cufflinks 0.613        
cufflinks 0.353        
cufflinks 0.401        
cufflinks 1.752       High
cufflinks 0.675        
cufflinks 0.942        
cufflinks 1.128        
cufflinks 1.274       High
cufflinks 0.33        
cufflinks 0.825        
cufflinks 0.25       Low
cufflinks 1.408       High
cufflinks 0.545        
cufflinks 0.323        
cufflinks 0.658        
cufflinks 0.643        
cufflinks 0.43        
cufflinks 0.231       Low
cufflinks 0.336        
cufflinks 2.432       High
cufflinks 0.496        
cufflinks 0.402        
cufflinks 0.138       Low

0 Strain