Gene : Bradi4g31790 B. distachyon v3.1
Defline:  (1 of 3) PF00584 - SecE/Sec61-gamma subunits of protein translocation complex (SecE) Genomic Order:  4088
Name:  ? Bradi4g31790 Secondary Identifier:  ? PAC:32790031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g31790 0.5kb upstream 0.5kb upstream 3539 true Bd4: 37453761-37457299 Brachypodium distachyon
Bradi4g31790 0.5kb upstream 0.5kb upstream 500 false Bd4: 37453761-37454260 Brachypodium distachyon
Bradi4g31790 0.5kb downstream 0.5kb downstream 3539 true Bd4: 37454261-37457799 Brachypodium distachyon
Bradi4g31790 0.5kb downstream 0.5kb downstream 500 false Bd4: 37457300-37457799 Brachypodium distachyon
Bradi4g31790 1.0kb upstream 1.0kb upstream 4039 true Bd4: 37453261-37457299 Brachypodium distachyon
Bradi4g31790 1.0kb upstream 1.0kb upstream 1000 false Bd4: 37453261-37454260 Brachypodium distachyon
Bradi4g31790 1.0kb downstream 1.0kb downstream 4039 true Bd4: 37454261-37458299 Brachypodium distachyon
Bradi4g31790 1.0kb downstream 1.0kb downstream 1000 false Bd4: 37457300-37458299 Brachypodium distachyon
Bradi4g31790 2.0kb upstream 2.0kb upstream 5039 true Bd4: 37452261-37457299 Brachypodium distachyon
Bradi4g31790 2.0kb upstream 2.0kb upstream 2000 false Bd4: 37452261-37454260 Brachypodium distachyon
Bradi4g31790 2.0kb downstream 2.0kb downstream 5039 true Bd4: 37454261-37459299 Brachypodium distachyon
Bradi4g31790 2.0kb downstream 2.0kb downstream 2000 false Bd4: 37457300-37459299 Brachypodium distachyon
Bradi4g31790 5.0kb upstream 5.0kb upstream 8039 true Bd4: 37449261-37457299 Brachypodium distachyon
Bradi4g31790 5.0kb upstream 5.0kb upstream 5000 false Bd4: 37449261-37454260 Brachypodium distachyon
Bradi4g31790 5.0kb downstream 5.0kb downstream 8039 true Bd4: 37454261-37462299 Brachypodium distachyon
Bradi4g31790 5.0kb downstream 5.0kb downstream 5000 false Bd4: 37457300-37462299 Brachypodium distachyon
Bradi4g31790 10.0kb upstream 10.0kb upstream 13039 true Bd4: 37444261-37457299 Brachypodium distachyon
Bradi4g31790 10.0kb upstream 10.0kb upstream 10000 false Bd4: 37444261-37454260 Brachypodium distachyon
Bradi4g31790 10.0kb downstream 10.0kb downstream 13039 true Bd4: 37454261-37467299 Brachypodium distachyon
Bradi4g31790 10.0kb downstream 10.0kb downstream 10000 false Bd4: 37457300-37467299 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582595 5269 Grass View MSA
122048579 5273 Angiosperm View MSA
121351446 5274 Embryophyte View MSA
123382170 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.921        
cufflinks 2.561        
cufflinks 2.233        
cufflinks 3.325       High
cufflinks 1.508        
cufflinks 2.072        
cufflinks 2.206        
cufflinks 1.626        
cufflinks 2.149        
cufflinks 3.051       High
cufflinks 1.402        
cufflinks 1.431        
cufflinks 0.836       Low
cufflinks 1.381        
cufflinks 1.909        
cufflinks 1.887        
cufflinks 2.037        
cufflinks 0.639       Low
cufflinks 1.331        
cufflinks 0.707       Low
cufflinks 1.701        
cufflinks 2.037        
cufflinks 1.687        
cufflinks 1.908        
cufflinks 2.708        
cufflinks 2.537        
cufflinks 0.988       Low
cufflinks 2.986       High
cufflinks 2.571        
cufflinks 2.14        

0 Strain