Gene : Bradi3g43520 B. distachyon v3.1
Defline:  (1 of 1) PF16053 - Mitochondrial 28S ribosomal protein S34 (MRP-S34) Genomic Order:  5373
Name:  ? Bradi3g43520 Secondary Identifier:  ? PAC:32814501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g43520 0.5kb upstream 0.5kb upstream 3635 true Bd3: 44788531-44792165 Brachypodium distachyon
Bradi3g43520 0.5kb upstream 0.5kb upstream 500 false Bd3: 44791666-44792165 Brachypodium distachyon
Bradi3g43520 0.5kb downstream 0.5kb downstream 3635 true Bd3: 44788031-44791665 Brachypodium distachyon
Bradi3g43520 0.5kb downstream 0.5kb downstream 500 false Bd3: 44788031-44788530 Brachypodium distachyon
Bradi3g43520 1.0kb upstream 1.0kb upstream 4135 true Bd3: 44788531-44792665 Brachypodium distachyon
Bradi3g43520 1.0kb upstream 1.0kb upstream 1000 false Bd3: 44791666-44792665 Brachypodium distachyon
Bradi3g43520 1.0kb downstream 1.0kb downstream 4135 true Bd3: 44787531-44791665 Brachypodium distachyon
Bradi3g43520 1.0kb downstream 1.0kb downstream 1000 false Bd3: 44787531-44788530 Brachypodium distachyon
Bradi3g43520 2.0kb upstream 2.0kb upstream 5135 true Bd3: 44788531-44793665 Brachypodium distachyon
Bradi3g43520 2.0kb upstream 2.0kb upstream 2000 false Bd3: 44791666-44793665 Brachypodium distachyon
Bradi3g43520 2.0kb downstream 2.0kb downstream 5135 true Bd3: 44786531-44791665 Brachypodium distachyon
Bradi3g43520 2.0kb downstream 2.0kb downstream 2000 false Bd3: 44786531-44788530 Brachypodium distachyon
Bradi3g43520 5.0kb upstream 5.0kb upstream 8135 true Bd3: 44788531-44796665 Brachypodium distachyon
Bradi3g43520 5.0kb upstream 5.0kb upstream 5000 false Bd3: 44791666-44796665 Brachypodium distachyon
Bradi3g43520 5.0kb downstream 5.0kb downstream 8135 true Bd3: 44783531-44791665 Brachypodium distachyon
Bradi3g43520 5.0kb downstream 5.0kb downstream 5000 false Bd3: 44783531-44788530 Brachypodium distachyon
Bradi3g43520 10.0kb upstream 10.0kb upstream 13135 true Bd3: 44788531-44801665 Brachypodium distachyon
Bradi3g43520 10.0kb upstream 10.0kb upstream 10000 false Bd3: 44791666-44801665 Brachypodium distachyon
Bradi3g43520 10.0kb downstream 10.0kb downstream 13135 true Bd3: 44778531-44791665 Brachypodium distachyon
Bradi3g43520 10.0kb downstream 10.0kb downstream 10000 false Bd3: 44778531-44788530 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586389 5269 Grass View MSA
122043343 5273 Angiosperm View MSA
121350318 5274 Embryophyte View MSA
123423853 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.307        
cufflinks 6.477        
cufflinks 5.813        
cufflinks 8.444        
cufflinks 5.421        
cufflinks 5.311        
cufflinks 6.197        
cufflinks 4.47        
cufflinks 5.265        
cufflinks 6.863        
cufflinks 2.359       Low
cufflinks 3.599        
cufflinks 1.307       Low
cufflinks 2.346       Low
cufflinks 3.408        
cufflinks 4.652        
cufflinks 8.888        
cufflinks 9.11        
cufflinks 7.327        
cufflinks 7.598        
cufflinks 7.302        
cufflinks 4.212        
cufflinks 4.565        
cufflinks 4.896        
cufflinks 7.593        
cufflinks 7.338        
cufflinks 2.409       Low
cufflinks 6.527        
cufflinks 5.467        
cufflinks 6.636        

0 Strain