Gene : Bradi3g43840 B. distachyon v3.1
Defline:  (1 of 3) KOG3436 - 60S ribosomal protein L35 Genomic Order:  5417
Name:  ? Bradi3g43840 Secondary Identifier:  ? PAC:32822260
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g43840 0.5kb upstream 0.5kb upstream 2322 true Bd3: 45278896-45281217 Brachypodium distachyon
Bradi3g43840 0.5kb upstream 0.5kb upstream 500 false Bd3: 45278896-45279395 Brachypodium distachyon
Bradi3g43840 0.5kb downstream 0.5kb downstream 2322 true Bd3: 45279396-45281717 Brachypodium distachyon
Bradi3g43840 0.5kb downstream 0.5kb downstream 500 false Bd3: 45281218-45281717 Brachypodium distachyon
Bradi3g43840 1.0kb upstream 1.0kb upstream 2822 true Bd3: 45278396-45281217 Brachypodium distachyon
Bradi3g43840 1.0kb upstream 1.0kb upstream 1000 false Bd3: 45278396-45279395 Brachypodium distachyon
Bradi3g43840 1.0kb downstream 1.0kb downstream 2822 true Bd3: 45279396-45282217 Brachypodium distachyon
Bradi3g43840 1.0kb downstream 1.0kb downstream 1000 false Bd3: 45281218-45282217 Brachypodium distachyon
Bradi3g43840 2.0kb upstream 2.0kb upstream 3822 true Bd3: 45277396-45281217 Brachypodium distachyon
Bradi3g43840 2.0kb upstream 2.0kb upstream 2000 false Bd3: 45277396-45279395 Brachypodium distachyon
Bradi3g43840 2.0kb downstream 2.0kb downstream 3822 true Bd3: 45279396-45283217 Brachypodium distachyon
Bradi3g43840 2.0kb downstream 2.0kb downstream 2000 false Bd3: 45281218-45283217 Brachypodium distachyon
Bradi3g43840 5.0kb upstream 5.0kb upstream 6822 true Bd3: 45274396-45281217 Brachypodium distachyon
Bradi3g43840 5.0kb upstream 5.0kb upstream 5000 false Bd3: 45274396-45279395 Brachypodium distachyon
Bradi3g43840 5.0kb downstream 5.0kb downstream 6822 true Bd3: 45279396-45286217 Brachypodium distachyon
Bradi3g43840 5.0kb downstream 5.0kb downstream 5000 false Bd3: 45281218-45286217 Brachypodium distachyon
Bradi3g43840 10.0kb upstream 10.0kb upstream 11822 true Bd3: 45269396-45281217 Brachypodium distachyon
Bradi3g43840 10.0kb upstream 10.0kb upstream 10000 false Bd3: 45269396-45279395 Brachypodium distachyon
Bradi3g43840 10.0kb downstream 10.0kb downstream 11822 true Bd3: 45279396-45291217 Brachypodium distachyon
Bradi3g43840 10.0kb downstream 10.0kb downstream 10000 false Bd3: 45281218-45291217 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586801 5269 Grass View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.458     High  
cufflinks 65.637     High  
cufflinks 60.166     High  
cufflinks 60.735     High  
cufflinks 63.048     High  
cufflinks 58.266     High  
cufflinks 73.564     High  
cufflinks 59.357     High  
cufflinks 59.203     High  
cufflinks 54.407     High  
cufflinks 15.094     High Low
cufflinks 42.782     High  
cufflinks 9.39     High Low
cufflinks 13.703     High Low
cufflinks 29.509     High  
cufflinks 67.51     High  
cufflinks 106.581     High High
cufflinks 116.297     High High
cufflinks 102.007     High High
cufflinks 33.589     High  
cufflinks 95.359     High High
cufflinks 49.68     High  
cufflinks 51.895     High  
cufflinks 47.447     High  
cufflinks 63.043     High  
cufflinks 51.953     High  
cufflinks 13.063     High Low
cufflinks 55.824     High  
cufflinks 56.67     High  
cufflinks 85.121     High  

0 Strain