Gene : Bradi3g44030 B. distachyon v3.1
Defline:  (1 of 2) PF04359 - Protein of unknown function (DUF493) (DUF493) Genomic Order:  5440
Name:  ? Bradi3g44030 Secondary Identifier:  ? PAC:32822680
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g44030 0.5kb upstream 0.5kb upstream 3945 true Bd3: 45464043-45467987 Brachypodium distachyon
Bradi3g44030 0.5kb upstream 0.5kb upstream 500 false Bd3: 45464043-45464542 Brachypodium distachyon
Bradi3g44030 0.5kb downstream 0.5kb downstream 3945 true Bd3: 45464543-45468487 Brachypodium distachyon
Bradi3g44030 0.5kb downstream 0.5kb downstream 500 false Bd3: 45467988-45468487 Brachypodium distachyon
Bradi3g44030 1.0kb upstream 1.0kb upstream 4445 true Bd3: 45463543-45467987 Brachypodium distachyon
Bradi3g44030 1.0kb upstream 1.0kb upstream 1000 false Bd3: 45463543-45464542 Brachypodium distachyon
Bradi3g44030 1.0kb downstream 1.0kb downstream 4445 true Bd3: 45464543-45468987 Brachypodium distachyon
Bradi3g44030 1.0kb downstream 1.0kb downstream 1000 false Bd3: 45467988-45468987 Brachypodium distachyon
Bradi3g44030 2.0kb upstream 2.0kb upstream 5445 true Bd3: 45462543-45467987 Brachypodium distachyon
Bradi3g44030 2.0kb upstream 2.0kb upstream 2000 false Bd3: 45462543-45464542 Brachypodium distachyon
Bradi3g44030 2.0kb downstream 2.0kb downstream 5445 true Bd3: 45464543-45469987 Brachypodium distachyon
Bradi3g44030 2.0kb downstream 2.0kb downstream 2000 false Bd3: 45467988-45469987 Brachypodium distachyon
Bradi3g44030 5.0kb upstream 5.0kb upstream 8445 true Bd3: 45459543-45467987 Brachypodium distachyon
Bradi3g44030 5.0kb upstream 5.0kb upstream 5000 false Bd3: 45459543-45464542 Brachypodium distachyon
Bradi3g44030 5.0kb downstream 5.0kb downstream 8445 true Bd3: 45464543-45472987 Brachypodium distachyon
Bradi3g44030 5.0kb downstream 5.0kb downstream 5000 false Bd3: 45467988-45472987 Brachypodium distachyon
Bradi3g44030 10.0kb upstream 10.0kb upstream 13445 true Bd3: 45454543-45467987 Brachypodium distachyon
Bradi3g44030 10.0kb upstream 10.0kb upstream 10000 false Bd3: 45454543-45464542 Brachypodium distachyon
Bradi3g44030 10.0kb downstream 10.0kb downstream 13445 true Bd3: 45464543-45477987 Brachypodium distachyon
Bradi3g44030 10.0kb downstream 10.0kb downstream 10000 false Bd3: 45467988-45477987 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588166 5269 Grass View MSA
122048054 5273 Angiosperm View MSA
121348978 5274 Embryophyte View MSA
123426420 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.461       Low
cufflinks 2.292       High
cufflinks 2.234       High
cufflinks 1.554        
cufflinks 0.261       Low
cufflinks 1.533        
cufflinks 1.906        
cufflinks 0.893        
cufflinks 1.362        
cufflinks 1.49        
cufflinks 2.27       High
cufflinks 1.859        
cufflinks 1.519        
cufflinks 1.519        
cufflinks 0.497       Low
cufflinks 1.877        
cufflinks 0.42       Low
cufflinks 1.126        
cufflinks 0.309       Low
cufflinks 0.464       Low
cufflinks 0.457       Low
cufflinks 2.557       High
cufflinks 1.027        
cufflinks 0.997        
cufflinks 1.556        
cufflinks 2.124        
cufflinks 1.443        
cufflinks 2.49       High
cufflinks 2.234       High
cufflinks 1.218        

0 Strain