Gene : Bradi3g44000 B. distachyon v3.1
Defline:  (1 of 1) PTHR10953:SF9 - UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 5 Genomic Order:  5436
Name:  ? Bradi3g44000 Secondary Identifier:  ? PAC:32823295
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6823 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g44000 0.5kb upstream 0.5kb upstream 6479 true Bd3: 45426811-45433289 Brachypodium distachyon
Bradi3g44000 0.5kb upstream 0.5kb upstream 500 false Bd3: 45426811-45427310 Brachypodium distachyon
Bradi3g44000 0.5kb downstream 0.5kb downstream 6479 true Bd3: 45427311-45433789 Brachypodium distachyon
Bradi3g44000 0.5kb downstream 0.5kb downstream 500 false Bd3: 45433290-45433789 Brachypodium distachyon
Bradi3g44000 1.0kb upstream 1.0kb upstream 6979 true Bd3: 45426311-45433289 Brachypodium distachyon
Bradi3g44000 1.0kb upstream 1.0kb upstream 1000 false Bd3: 45426311-45427310 Brachypodium distachyon
Bradi3g44000 1.0kb downstream 1.0kb downstream 6979 true Bd3: 45427311-45434289 Brachypodium distachyon
Bradi3g44000 1.0kb downstream 1.0kb downstream 1000 false Bd3: 45433290-45434289 Brachypodium distachyon
Bradi3g44000 2.0kb upstream 2.0kb upstream 7979 true Bd3: 45425311-45433289 Brachypodium distachyon
Bradi3g44000 2.0kb upstream 2.0kb upstream 2000 false Bd3: 45425311-45427310 Brachypodium distachyon
Bradi3g44000 2.0kb downstream 2.0kb downstream 7979 true Bd3: 45427311-45435289 Brachypodium distachyon
Bradi3g44000 2.0kb downstream 2.0kb downstream 2000 false Bd3: 45433290-45435289 Brachypodium distachyon
Bradi3g44000 5.0kb upstream 5.0kb upstream 10979 true Bd3: 45422311-45433289 Brachypodium distachyon
Bradi3g44000 5.0kb upstream 5.0kb upstream 5000 false Bd3: 45422311-45427310 Brachypodium distachyon
Bradi3g44000 5.0kb downstream 5.0kb downstream 10979 true Bd3: 45427311-45438289 Brachypodium distachyon
Bradi3g44000 5.0kb downstream 5.0kb downstream 5000 false Bd3: 45433290-45438289 Brachypodium distachyon
Bradi3g44000 10.0kb upstream 10.0kb upstream 15979 true Bd3: 45417311-45433289 Brachypodium distachyon
Bradi3g44000 10.0kb upstream 10.0kb upstream 10000 false Bd3: 45417311-45427310 Brachypodium distachyon
Bradi3g44000 10.0kb downstream 10.0kb downstream 15979 true Bd3: 45427311-45443289 Brachypodium distachyon
Bradi3g44000 10.0kb downstream 10.0kb downstream 10000 false Bd3: 45433290-45443289 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579190 5269 Grass View MSA
122041922 5273 Angiosperm View MSA
121347564 5274 Embryophyte View MSA
123424275 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.012        
cufflinks 7.192        
cufflinks 6.588        
cufflinks 6.087        
cufflinks 5.708        
cufflinks 7.393        
cufflinks 6.939        
cufflinks 5.813        
cufflinks 7.086        
cufflinks 6.025        
cufflinks 4.155       Low
cufflinks 6.27        
cufflinks 3.88       Low
cufflinks 3.791       Low
cufflinks 6.97        
cufflinks 7.57        
cufflinks 7.794        
cufflinks 12.415     High High
cufflinks 8.95       High
cufflinks 4.096       Low
cufflinks 8.526        
cufflinks 6.848        
cufflinks 5.109        
cufflinks 6.295        
cufflinks 6.638        
cufflinks 6.274        
cufflinks 5.151        
cufflinks 6.245        
cufflinks 6.331        
cufflinks 7.289        

0 Strain