Gene : Bradi4g31460 B. distachyon v3.1
Defline:  (1 of 2) 2.7.6.5//3.2.1.37//3.2.1.55 - GTP diphosphokinase / Stringent factor // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  4052
Name:  ? Bradi4g31460 Secondary Identifier:  ? PAC:32785000
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g31460 0.5kb upstream 0.5kb upstream 4261 true Bd4: 37127870-37132130 Brachypodium distachyon
Bradi4g31460 0.5kb upstream 0.5kb upstream 500 false Bd4: 37127870-37128369 Brachypodium distachyon
Bradi4g31460 0.5kb downstream 0.5kb downstream 4261 true Bd4: 37128370-37132630 Brachypodium distachyon
Bradi4g31460 0.5kb downstream 0.5kb downstream 500 false Bd4: 37132131-37132630 Brachypodium distachyon
Bradi4g31460 1.0kb upstream 1.0kb upstream 4761 true Bd4: 37127370-37132130 Brachypodium distachyon
Bradi4g31460 1.0kb upstream 1.0kb upstream 1000 false Bd4: 37127370-37128369 Brachypodium distachyon
Bradi4g31460 1.0kb downstream 1.0kb downstream 4761 true Bd4: 37128370-37133130 Brachypodium distachyon
Bradi4g31460 1.0kb downstream 1.0kb downstream 1000 false Bd4: 37132131-37133130 Brachypodium distachyon
Bradi4g31460 2.0kb upstream 2.0kb upstream 5761 true Bd4: 37126370-37132130 Brachypodium distachyon
Bradi4g31460 2.0kb upstream 2.0kb upstream 2000 false Bd4: 37126370-37128369 Brachypodium distachyon
Bradi4g31460 2.0kb downstream 2.0kb downstream 5761 true Bd4: 37128370-37134130 Brachypodium distachyon
Bradi4g31460 2.0kb downstream 2.0kb downstream 2000 false Bd4: 37132131-37134130 Brachypodium distachyon
Bradi4g31460 5.0kb upstream 5.0kb upstream 8761 true Bd4: 37123370-37132130 Brachypodium distachyon
Bradi4g31460 5.0kb upstream 5.0kb upstream 5000 false Bd4: 37123370-37128369 Brachypodium distachyon
Bradi4g31460 5.0kb downstream 5.0kb downstream 8761 true Bd4: 37128370-37137130 Brachypodium distachyon
Bradi4g31460 5.0kb downstream 5.0kb downstream 5000 false Bd4: 37132131-37137130 Brachypodium distachyon
Bradi4g31460 10.0kb upstream 10.0kb upstream 13761 true Bd4: 37118370-37132130 Brachypodium distachyon
Bradi4g31460 10.0kb upstream 10.0kb upstream 10000 false Bd4: 37118370-37128369 Brachypodium distachyon
Bradi4g31460 10.0kb downstream 10.0kb downstream 13761 true Bd4: 37128370-37142130 Brachypodium distachyon
Bradi4g31460 10.0kb downstream 10.0kb downstream 10000 false Bd4: 37132131-37142130 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576636 5269 Grass View MSA
122044078 5273 Angiosperm View MSA
121346145 5274 Embryophyte View MSA
123428478 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.586     High  
cufflinks 5.993        
cufflinks 5.797        
cufflinks 4.541       Low
cufflinks 30.31     High High
cufflinks 8.23        
cufflinks 6.94        
cufflinks 7.168        
cufflinks 7.285        
cufflinks 5.262        
cufflinks 18.53     High High
cufflinks 12.078     High  
cufflinks 12.673     High  
cufflinks 9.444     High  
cufflinks 12.526     High  
cufflinks 9.519     High  
cufflinks 6.018        
cufflinks 11.662     High  
cufflinks 14.616     High  
cufflinks 38.968     High High
cufflinks 11.339     High  
cufflinks 7.486        
cufflinks 6.743        
cufflinks 7.301        
cufflinks 6.115        
cufflinks 5.335        
cufflinks 14.002     High  
cufflinks 5.831        
cufflinks 5.331        
cufflinks 12.378     High  

0 Strain