Gene : Bradi3g40540 B. distachyon v3.1
Defline:  (1 of 18) PF04782 - Protein of unknown function (DUF632) (DUF632) Genomic Order:  4993
Name:  ? Bradi3g40540 Secondary Identifier:  ? PAC:32820698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g40540 0.5kb upstream 0.5kb upstream 6359 true Bd3: 42446370-42452728 Brachypodium distachyon
Bradi3g40540 0.5kb upstream 0.5kb upstream 500 false Bd3: 42452229-42452728 Brachypodium distachyon
Bradi3g40540 0.5kb downstream 0.5kb downstream 6359 true Bd3: 42445870-42452228 Brachypodium distachyon
Bradi3g40540 0.5kb downstream 0.5kb downstream 500 false Bd3: 42445870-42446369 Brachypodium distachyon
Bradi3g40540 1.0kb upstream 1.0kb upstream 6859 true Bd3: 42446370-42453228 Brachypodium distachyon
Bradi3g40540 1.0kb upstream 1.0kb upstream 1000 false Bd3: 42452229-42453228 Brachypodium distachyon
Bradi3g40540 1.0kb downstream 1.0kb downstream 6859 true Bd3: 42445370-42452228 Brachypodium distachyon
Bradi3g40540 1.0kb downstream 1.0kb downstream 1000 false Bd3: 42445370-42446369 Brachypodium distachyon
Bradi3g40540 2.0kb upstream 2.0kb upstream 7859 true Bd3: 42446370-42454228 Brachypodium distachyon
Bradi3g40540 2.0kb upstream 2.0kb upstream 2000 false Bd3: 42452229-42454228 Brachypodium distachyon
Bradi3g40540 2.0kb downstream 2.0kb downstream 7859 true Bd3: 42444370-42452228 Brachypodium distachyon
Bradi3g40540 2.0kb downstream 2.0kb downstream 2000 false Bd3: 42444370-42446369 Brachypodium distachyon
Bradi3g40540 5.0kb upstream 5.0kb upstream 10859 true Bd3: 42446370-42457228 Brachypodium distachyon
Bradi3g40540 5.0kb upstream 5.0kb upstream 5000 false Bd3: 42452229-42457228 Brachypodium distachyon
Bradi3g40540 5.0kb downstream 5.0kb downstream 10859 true Bd3: 42441370-42452228 Brachypodium distachyon
Bradi3g40540 5.0kb downstream 5.0kb downstream 5000 false Bd3: 42441370-42446369 Brachypodium distachyon
Bradi3g40540 10.0kb upstream 10.0kb upstream 15859 true Bd3: 42446370-42462228 Brachypodium distachyon
Bradi3g40540 10.0kb upstream 10.0kb upstream 10000 false Bd3: 42452229-42462228 Brachypodium distachyon
Bradi3g40540 10.0kb downstream 10.0kb downstream 15859 true Bd3: 42436370-42452228 Brachypodium distachyon
Bradi3g40540 10.0kb downstream 10.0kb downstream 10000 false Bd3: 42436370-42446369 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581489 5269 Grass View MSA
122046534 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.661        
cufflinks 1.018        
cufflinks 1.216       High
cufflinks 0.713        
cufflinks 0.469        
cufflinks 0.763        
cufflinks 0.725        
cufflinks 0.693        
cufflinks 0.667        
cufflinks 0.444        
cufflinks 0.614        
cufflinks 0.974        
cufflinks 0.229       Low
cufflinks 0.239       Low
cufflinks 0.642        
cufflinks 0.889        
cufflinks 0.372        
cufflinks 1.128       High
cufflinks 0.799        
cufflinks 0.113     Low Low
cufflinks 0.501        
cufflinks 1.055        
cufflinks 0.695        
cufflinks 0.439        
cufflinks 0.59        
cufflinks 1.015        
cufflinks 0.084     Low Low
cufflinks 0.789        
cufflinks 0.828        
cufflinks 1.284       High

0 Strain