Gene : Bradi3g40970 B. distachyon v3.1
Defline:  (1 of 3) PTHR23308//PTHR23308:SF34 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 // F16B3.3 PROTEIN Genomic Order:  5052
Name:  ? Bradi3g40970 Secondary Identifier:  ? PAC:32813595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g40970 0.5kb upstream 0.5kb upstream 2353 true Bd3: 42773383-42775735 Brachypodium distachyon
Bradi3g40970 0.5kb upstream 0.5kb upstream 500 false Bd3: 42773383-42773882 Brachypodium distachyon
Bradi3g40970 0.5kb downstream 0.5kb downstream 2353 true Bd3: 42773883-42776235 Brachypodium distachyon
Bradi3g40970 0.5kb downstream 0.5kb downstream 500 false Bd3: 42775736-42776235 Brachypodium distachyon
Bradi3g40970 1.0kb upstream 1.0kb upstream 2853 true Bd3: 42772883-42775735 Brachypodium distachyon
Bradi3g40970 1.0kb upstream 1.0kb upstream 1000 false Bd3: 42772883-42773882 Brachypodium distachyon
Bradi3g40970 1.0kb downstream 1.0kb downstream 2853 true Bd3: 42773883-42776735 Brachypodium distachyon
Bradi3g40970 1.0kb downstream 1.0kb downstream 1000 false Bd3: 42775736-42776735 Brachypodium distachyon
Bradi3g40970 2.0kb upstream 2.0kb upstream 3853 true Bd3: 42771883-42775735 Brachypodium distachyon
Bradi3g40970 2.0kb upstream 2.0kb upstream 2000 false Bd3: 42771883-42773882 Brachypodium distachyon
Bradi3g40970 2.0kb downstream 2.0kb downstream 3853 true Bd3: 42773883-42777735 Brachypodium distachyon
Bradi3g40970 2.0kb downstream 2.0kb downstream 2000 false Bd3: 42775736-42777735 Brachypodium distachyon
Bradi3g40970 5.0kb upstream 5.0kb upstream 6853 true Bd3: 42768883-42775735 Brachypodium distachyon
Bradi3g40970 5.0kb upstream 5.0kb upstream 5000 false Bd3: 42768883-42773882 Brachypodium distachyon
Bradi3g40970 5.0kb downstream 5.0kb downstream 6853 true Bd3: 42773883-42780735 Brachypodium distachyon
Bradi3g40970 5.0kb downstream 5.0kb downstream 5000 false Bd3: 42775736-42780735 Brachypodium distachyon
Bradi3g40970 10.0kb upstream 10.0kb upstream 11853 true Bd3: 42763883-42775735 Brachypodium distachyon
Bradi3g40970 10.0kb upstream 10.0kb upstream 10000 false Bd3: 42763883-42773882 Brachypodium distachyon
Bradi3g40970 10.0kb downstream 10.0kb downstream 11853 true Bd3: 42773883-42785735 Brachypodium distachyon
Bradi3g40970 10.0kb downstream 10.0kb downstream 10000 false Bd3: 42775736-42785735 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589543 5269 Grass View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.435        
cufflinks 3.479        
cufflinks 4.969       High
cufflinks 3.325        
cufflinks 2.21        
cufflinks 3.445        
cufflinks 2.907        
cufflinks 3.166        
cufflinks 3.865        
cufflinks 3.168        
cufflinks 2.649        
cufflinks 4.575        
cufflinks 2.759        
cufflinks 2.13        
cufflinks 4.001        
cufflinks 3.178        
cufflinks 2.739        
cufflinks 4.875       High
cufflinks 2.292        
cufflinks 0.956       Low
cufflinks 2.924        
cufflinks 4.365        
cufflinks 3.07        
cufflinks 2.757        
cufflinks 2.916        
cufflinks 4.442        
cufflinks 2.466        
cufflinks 4.67       High
cufflinks 3.688        
cufflinks 5.071       High

0 Strain