Gene : Bradi3g41230 B. distachyon v3.1
Defline:  (1 of 2) K07178 - RIO kinase 1 (RIOK1) Genomic Order:  5083
Name:  ? Bradi3g41230 Secondary Identifier:  ? PAC:32820174
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g41230 0.5kb upstream 0.5kb upstream 5996 true Bd3: 42923614-42929609 Brachypodium distachyon
Bradi3g41230 0.5kb upstream 0.5kb upstream 500 false Bd3: 42929110-42929609 Brachypodium distachyon
Bradi3g41230 0.5kb downstream 0.5kb downstream 5996 true Bd3: 42923114-42929109 Brachypodium distachyon
Bradi3g41230 0.5kb downstream 0.5kb downstream 500 false Bd3: 42923114-42923613 Brachypodium distachyon
Bradi3g41230 1.0kb upstream 1.0kb upstream 6496 true Bd3: 42923614-42930109 Brachypodium distachyon
Bradi3g41230 1.0kb upstream 1.0kb upstream 1000 false Bd3: 42929110-42930109 Brachypodium distachyon
Bradi3g41230 1.0kb downstream 1.0kb downstream 6496 true Bd3: 42922614-42929109 Brachypodium distachyon
Bradi3g41230 1.0kb downstream 1.0kb downstream 1000 false Bd3: 42922614-42923613 Brachypodium distachyon
Bradi3g41230 2.0kb upstream 2.0kb upstream 7496 true Bd3: 42923614-42931109 Brachypodium distachyon
Bradi3g41230 2.0kb upstream 2.0kb upstream 2000 false Bd3: 42929110-42931109 Brachypodium distachyon
Bradi3g41230 2.0kb downstream 2.0kb downstream 7496 true Bd3: 42921614-42929109 Brachypodium distachyon
Bradi3g41230 2.0kb downstream 2.0kb downstream 2000 false Bd3: 42921614-42923613 Brachypodium distachyon
Bradi3g41230 5.0kb upstream 5.0kb upstream 10496 true Bd3: 42923614-42934109 Brachypodium distachyon
Bradi3g41230 5.0kb upstream 5.0kb upstream 5000 false Bd3: 42929110-42934109 Brachypodium distachyon
Bradi3g41230 5.0kb downstream 5.0kb downstream 10496 true Bd3: 42918614-42929109 Brachypodium distachyon
Bradi3g41230 5.0kb downstream 5.0kb downstream 5000 false Bd3: 42918614-42923613 Brachypodium distachyon
Bradi3g41230 10.0kb upstream 10.0kb upstream 15496 true Bd3: 42923614-42939109 Brachypodium distachyon
Bradi3g41230 10.0kb upstream 10.0kb upstream 10000 false Bd3: 42929110-42939109 Brachypodium distachyon
Bradi3g41230 10.0kb downstream 10.0kb downstream 15496 true Bd3: 42913614-42929109 Brachypodium distachyon
Bradi3g41230 10.0kb downstream 10.0kb downstream 10000 false Bd3: 42913614-42923613 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568538 5269 Grass View MSA
122044010 5273 Angiosperm View MSA
121344530 5274 Embryophyte View MSA
123428706 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.477        
cufflinks 2.334        
cufflinks 1.934        
cufflinks 2.282        
cufflinks 0.85       Low
cufflinks 2.032        
cufflinks 1.982        
cufflinks 1.835        
cufflinks 1.997        
cufflinks 1.66        
cufflinks 1.805        
cufflinks 1.722        
cufflinks 0.968       Low
cufflinks 1.262        
cufflinks 1.014       Low
cufflinks 1.946        
cufflinks 1.82        
cufflinks 2.921       High
cufflinks 1.41        
cufflinks 0.505       Low
cufflinks 1.55        
cufflinks 1.828        
cufflinks 1.744        
cufflinks 1.791        
cufflinks 2.185        
cufflinks 1.661        
cufflinks 1.364        
cufflinks 1.609        
cufflinks 1.544        
cufflinks 1.941        

0 Strain