Gene : Bradi3g41370 B. distachyon v3.1
Defline:  (1 of 2) PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Genomic Order:  5101
Name:  ? Bradi3g41370 Secondary Identifier:  ? PAC:32817189
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g41370 0.5kb upstream 0.5kb upstream 3801 true Bd3: 43053256-43057056 Brachypodium distachyon
Bradi3g41370 0.5kb upstream 0.5kb upstream 500 false Bd3: 43056557-43057056 Brachypodium distachyon
Bradi3g41370 0.5kb downstream 0.5kb downstream 3801 true Bd3: 43052756-43056556 Brachypodium distachyon
Bradi3g41370 0.5kb downstream 0.5kb downstream 500 false Bd3: 43052756-43053255 Brachypodium distachyon
Bradi3g41370 1.0kb upstream 1.0kb upstream 4301 true Bd3: 43053256-43057556 Brachypodium distachyon
Bradi3g41370 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43056557-43057556 Brachypodium distachyon
Bradi3g41370 1.0kb downstream 1.0kb downstream 4301 true Bd3: 43052256-43056556 Brachypodium distachyon
Bradi3g41370 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43052256-43053255 Brachypodium distachyon
Bradi3g41370 2.0kb upstream 2.0kb upstream 5301 true Bd3: 43053256-43058556 Brachypodium distachyon
Bradi3g41370 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43056557-43058556 Brachypodium distachyon
Bradi3g41370 2.0kb downstream 2.0kb downstream 5301 true Bd3: 43051256-43056556 Brachypodium distachyon
Bradi3g41370 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43051256-43053255 Brachypodium distachyon
Bradi3g41370 5.0kb upstream 5.0kb upstream 8301 true Bd3: 43053256-43061556 Brachypodium distachyon
Bradi3g41370 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43056557-43061556 Brachypodium distachyon
Bradi3g41370 5.0kb downstream 5.0kb downstream 8301 true Bd3: 43048256-43056556 Brachypodium distachyon
Bradi3g41370 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43048256-43053255 Brachypodium distachyon
Bradi3g41370 10.0kb upstream 10.0kb upstream 13301 true Bd3: 43053256-43066556 Brachypodium distachyon
Bradi3g41370 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43056557-43066556 Brachypodium distachyon
Bradi3g41370 10.0kb downstream 10.0kb downstream 13301 true Bd3: 43043256-43056556 Brachypodium distachyon
Bradi3g41370 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43043256-43053255 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574754 5269 Grass View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.66     High  
cufflinks 16.906     High  
cufflinks 19.781     High  
cufflinks 20.713     High  
cufflinks 29.722     High High
cufflinks 17.649     High  
cufflinks 18.036     High  
cufflinks 19.049     High  
cufflinks 18.412     High  
cufflinks 19.259     High  
cufflinks 11.301     High Low
cufflinks 17.337     High  
cufflinks 10.838     High Low
cufflinks 11.69     High Low
cufflinks 20.236     High  
cufflinks 15.035     High  
cufflinks 28.716     High  
cufflinks 28.666     High  
cufflinks 43.117     High High
cufflinks 21.486     High  
cufflinks 38.253     High High
cufflinks 17.168     High  
cufflinks 20.036     High  
cufflinks 18.185     High  
cufflinks 17.408     High  
cufflinks 22.132     High  
cufflinks 14.349     High Low
cufflinks 22.523     High  
cufflinks 19.194     High  
cufflinks 29.782     High High

0 Strain