Gene : Bradi3g41270 B. distachyon v3.1
Defline:  (1 of 1) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Genomic Order:  5087
Name:  ? Bradi3g41270 Secondary Identifier:  ? PAC:32814840
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5188 Brachypodium distachyon pathologic  
Bdistachyon PWY-5918 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g41270 0.5kb upstream 0.5kb upstream 3324 true Bd3: 42967391-42970714 Brachypodium distachyon
Bradi3g41270 0.5kb upstream 0.5kb upstream 500 false Bd3: 42967391-42967890 Brachypodium distachyon
Bradi3g41270 0.5kb downstream 0.5kb downstream 3324 true Bd3: 42967891-42971214 Brachypodium distachyon
Bradi3g41270 0.5kb downstream 0.5kb downstream 500 false Bd3: 42970715-42971214 Brachypodium distachyon
Bradi3g41270 1.0kb upstream 1.0kb upstream 3824 true Bd3: 42966891-42970714 Brachypodium distachyon
Bradi3g41270 1.0kb upstream 1.0kb upstream 1000 false Bd3: 42966891-42967890 Brachypodium distachyon
Bradi3g41270 1.0kb downstream 1.0kb downstream 3824 true Bd3: 42967891-42971714 Brachypodium distachyon
Bradi3g41270 1.0kb downstream 1.0kb downstream 1000 false Bd3: 42970715-42971714 Brachypodium distachyon
Bradi3g41270 2.0kb upstream 2.0kb upstream 4824 true Bd3: 42965891-42970714 Brachypodium distachyon
Bradi3g41270 2.0kb upstream 2.0kb upstream 2000 false Bd3: 42965891-42967890 Brachypodium distachyon
Bradi3g41270 2.0kb downstream 2.0kb downstream 4824 true Bd3: 42967891-42972714 Brachypodium distachyon
Bradi3g41270 2.0kb downstream 2.0kb downstream 2000 false Bd3: 42970715-42972714 Brachypodium distachyon
Bradi3g41270 5.0kb upstream 5.0kb upstream 7824 true Bd3: 42962891-42970714 Brachypodium distachyon
Bradi3g41270 5.0kb upstream 5.0kb upstream 5000 false Bd3: 42962891-42967890 Brachypodium distachyon
Bradi3g41270 5.0kb downstream 5.0kb downstream 7824 true Bd3: 42967891-42975714 Brachypodium distachyon
Bradi3g41270 5.0kb downstream 5.0kb downstream 5000 false Bd3: 42970715-42975714 Brachypodium distachyon
Bradi3g41270 10.0kb upstream 10.0kb upstream 12824 true Bd3: 42957891-42970714 Brachypodium distachyon
Bradi3g41270 10.0kb upstream 10.0kb upstream 10000 false Bd3: 42957891-42967890 Brachypodium distachyon
Bradi3g41270 10.0kb downstream 10.0kb downstream 12824 true Bd3: 42967891-42980714 Brachypodium distachyon
Bradi3g41270 10.0kb downstream 10.0kb downstream 10000 false Bd3: 42970715-42980714 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575850 5269 Grass View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 163.859     High  
cufflinks 219.058     High High
cufflinks 195.211     High  
cufflinks 216.615     High High
cufflinks 105.417     High  
cufflinks 173.158     High  
cufflinks 192.218     High  
cufflinks 138.888     High  
cufflinks 144.539     High  
cufflinks 150.032     High  
cufflinks 97.056     High  
cufflinks 179.347     High  
cufflinks 85.652     High  
cufflinks 100.622     High  
cufflinks 131.143     High  
cufflinks 187.861     High  
cufflinks 161.402     High  
cufflinks 36.848     High Low
cufflinks 122.138     High  
cufflinks 21.514     High Low
cufflinks 119.201     High  
cufflinks 154.032     High  
cufflinks 122.983     High  
cufflinks 143.141     High  
cufflinks 167.988     High  
cufflinks 187.806     High  
cufflinks 62.124     High Low
cufflinks 160.881     High  
cufflinks 174.055     High  
cufflinks 214.48     High High

0 Strain