Gene : Bradi3g41500 B. distachyon v3.1
Defline:  (1 of 1) PTHR31717:SF3 - ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED Genomic Order:  5117
Name:  ? Bradi3g41500 Secondary Identifier:  ? PAC:32819965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g41500 0.5kb upstream 0.5kb upstream 4875 true Bd3: 43164893-43169767 Brachypodium distachyon
Bradi3g41500 0.5kb upstream 0.5kb upstream 500 false Bd3: 43169268-43169767 Brachypodium distachyon
Bradi3g41500 0.5kb downstream 0.5kb downstream 4875 true Bd3: 43164393-43169267 Brachypodium distachyon
Bradi3g41500 0.5kb downstream 0.5kb downstream 500 false Bd3: 43164393-43164892 Brachypodium distachyon
Bradi3g41500 1.0kb upstream 1.0kb upstream 5375 true Bd3: 43164893-43170267 Brachypodium distachyon
Bradi3g41500 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43169268-43170267 Brachypodium distachyon
Bradi3g41500 1.0kb downstream 1.0kb downstream 5375 true Bd3: 43163893-43169267 Brachypodium distachyon
Bradi3g41500 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43163893-43164892 Brachypodium distachyon
Bradi3g41500 2.0kb upstream 2.0kb upstream 6375 true Bd3: 43164893-43171267 Brachypodium distachyon
Bradi3g41500 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43169268-43171267 Brachypodium distachyon
Bradi3g41500 2.0kb downstream 2.0kb downstream 6375 true Bd3: 43162893-43169267 Brachypodium distachyon
Bradi3g41500 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43162893-43164892 Brachypodium distachyon
Bradi3g41500 5.0kb upstream 5.0kb upstream 9375 true Bd3: 43164893-43174267 Brachypodium distachyon
Bradi3g41500 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43169268-43174267 Brachypodium distachyon
Bradi3g41500 5.0kb downstream 5.0kb downstream 9375 true Bd3: 43159893-43169267 Brachypodium distachyon
Bradi3g41500 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43159893-43164892 Brachypodium distachyon
Bradi3g41500 10.0kb upstream 10.0kb upstream 14375 true Bd3: 43164893-43179267 Brachypodium distachyon
Bradi3g41500 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43169268-43179267 Brachypodium distachyon
Bradi3g41500 10.0kb downstream 10.0kb downstream 14375 true Bd3: 43154893-43169267 Brachypodium distachyon
Bradi3g41500 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43154893-43164892 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579908 5269 Grass View MSA
122050487 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350351 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.958     High High
cufflinks 8.489        
cufflinks 7.209        
cufflinks 4.978        
cufflinks 5.02        
cufflinks 4.561        
cufflinks 10.151     High High
cufflinks 1.314       Low
cufflinks 2.005        
cufflinks 1.93        
cufflinks 1.717        
cufflinks 2.532        
cufflinks 1.887        
cufflinks 0.908       Low
cufflinks 1.152       Low
cufflinks 6.654        
cufflinks 3.09        
cufflinks 11.146       High
cufflinks 11.031       High
cufflinks 1.759        
cufflinks 6.623        
cufflinks 1.529       Low
cufflinks 1.131       Low
cufflinks 1.876        
cufflinks 4.154        
cufflinks 6.329        
cufflinks 1.408       Low
cufflinks 4.626        
cufflinks 2.513        
cufflinks 10.881       High

0 Strain