Gene : Bradi3g42320 B. distachyon v3.1
Defline:  (1 of 1) PTHR20863//PTHR20863:SF33 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED Genomic Order:  5220
Name:  ? Bradi3g42320 Secondary Identifier:  ? PAC:32822728
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42320 0.5kb upstream 0.5kb upstream 3264 true Bd3: 43754800-43758063 Brachypodium distachyon
Bradi3g42320 0.5kb upstream 0.5kb upstream 500 false Bd3: 43754800-43755299 Brachypodium distachyon
Bradi3g42320 0.5kb downstream 0.5kb downstream 3264 true Bd3: 43755300-43758563 Brachypodium distachyon
Bradi3g42320 0.5kb downstream 0.5kb downstream 500 false Bd3: 43758064-43758563 Brachypodium distachyon
Bradi3g42320 1.0kb upstream 1.0kb upstream 3764 true Bd3: 43754300-43758063 Brachypodium distachyon
Bradi3g42320 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43754300-43755299 Brachypodium distachyon
Bradi3g42320 1.0kb downstream 1.0kb downstream 3764 true Bd3: 43755300-43759063 Brachypodium distachyon
Bradi3g42320 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43758064-43759063 Brachypodium distachyon
Bradi3g42320 2.0kb upstream 2.0kb upstream 4764 true Bd3: 43753300-43758063 Brachypodium distachyon
Bradi3g42320 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43753300-43755299 Brachypodium distachyon
Bradi3g42320 2.0kb downstream 2.0kb downstream 4764 true Bd3: 43755300-43760063 Brachypodium distachyon
Bradi3g42320 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43758064-43760063 Brachypodium distachyon
Bradi3g42320 5.0kb upstream 5.0kb upstream 7764 true Bd3: 43750300-43758063 Brachypodium distachyon
Bradi3g42320 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43750300-43755299 Brachypodium distachyon
Bradi3g42320 5.0kb downstream 5.0kb downstream 7764 true Bd3: 43755300-43763063 Brachypodium distachyon
Bradi3g42320 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43758064-43763063 Brachypodium distachyon
Bradi3g42320 10.0kb upstream 10.0kb upstream 12764 true Bd3: 43745300-43758063 Brachypodium distachyon
Bradi3g42320 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43745300-43755299 Brachypodium distachyon
Bradi3g42320 10.0kb downstream 10.0kb downstream 12764 true Bd3: 43755300-43768063 Brachypodium distachyon
Bradi3g42320 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43758064-43768063 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586574 5269 Grass View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.568     High  
cufflinks 77.741     High  
cufflinks 87.773     High  
cufflinks 73.393     High  
cufflinks 68.344     High  
cufflinks 79.353     High  
cufflinks 80.839     High  
cufflinks 83.715     High  
cufflinks 78.325     High  
cufflinks 74.664     High  
cufflinks 35.12     High Low
cufflinks 63.163     High  
cufflinks 45.478     High Low
cufflinks 38.112     High Low
cufflinks 48.849     High  
cufflinks 90.174     High  
cufflinks 104.223     High High
cufflinks 121.141     High High
cufflinks 119.654     High High
cufflinks 37.6     High Low
cufflinks 144.235     High High
cufflinks 73.621     High  
cufflinks 68.626     High  
cufflinks 67.014     High  
cufflinks 66.92     High  
cufflinks 76.054     High  
cufflinks 40.685     High Low
cufflinks 87.278     High  
cufflinks 89.894     High  
cufflinks 100.694     High High

0 Strain