Gene : Bradi3g42330 B. distachyon v3.1
Defline:  (1 of 1) PTHR23421:SF52 - BETA-GALACTOSIDASE 11-RELATED Genomic Order:  5221
Name:  ? Bradi3g42330 Secondary Identifier:  ? PAC:32818535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42330 0.5kb upstream 0.5kb upstream 4418 true Bd3: 43758822-43763239 Brachypodium distachyon
Bradi3g42330 0.5kb upstream 0.5kb upstream 500 false Bd3: 43762740-43763239 Brachypodium distachyon
Bradi3g42330 0.5kb downstream 0.5kb downstream 4418 true Bd3: 43758322-43762739 Brachypodium distachyon
Bradi3g42330 0.5kb downstream 0.5kb downstream 500 false Bd3: 43758322-43758821 Brachypodium distachyon
Bradi3g42330 1.0kb upstream 1.0kb upstream 4918 true Bd3: 43758822-43763739 Brachypodium distachyon
Bradi3g42330 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43762740-43763739 Brachypodium distachyon
Bradi3g42330 1.0kb downstream 1.0kb downstream 4918 true Bd3: 43757822-43762739 Brachypodium distachyon
Bradi3g42330 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43757822-43758821 Brachypodium distachyon
Bradi3g42330 2.0kb upstream 2.0kb upstream 5918 true Bd3: 43758822-43764739 Brachypodium distachyon
Bradi3g42330 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43762740-43764739 Brachypodium distachyon
Bradi3g42330 2.0kb downstream 2.0kb downstream 5918 true Bd3: 43756822-43762739 Brachypodium distachyon
Bradi3g42330 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43756822-43758821 Brachypodium distachyon
Bradi3g42330 5.0kb upstream 5.0kb upstream 8918 true Bd3: 43758822-43767739 Brachypodium distachyon
Bradi3g42330 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43762740-43767739 Brachypodium distachyon
Bradi3g42330 5.0kb downstream 5.0kb downstream 8918 true Bd3: 43753822-43762739 Brachypodium distachyon
Bradi3g42330 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43753822-43758821 Brachypodium distachyon
Bradi3g42330 10.0kb upstream 10.0kb upstream 13918 true Bd3: 43758822-43772739 Brachypodium distachyon
Bradi3g42330 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43762740-43772739 Brachypodium distachyon
Bradi3g42330 10.0kb downstream 10.0kb downstream 13918 true Bd3: 43748822-43762739 Brachypodium distachyon
Bradi3g42330 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43748822-43758821 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578833 5269 Grass View MSA
122042357 5273 Angiosperm View MSA
121309952 5274 Embryophyte View MSA
123347574 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.154       High
cufflinks 0.011     Low  
cufflinks 0.022     Low  
cufflinks 0.031     Low  
cufflinks 0.046     Low  
cufflinks 0.004     Low Low
cufflinks 0.051     Low  
cufflinks 0.116       High
cufflinks 0.065     Low  
cufflinks 0.013     Low  
cufflinks 0.047     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.011     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.02     Low  
cufflinks 0.237       High
cufflinks 0.033     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.165       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.3       High
cufflinks 0.226       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain