Gene : Bradi3g42532 B. distachyon v3.1
Defline:  (1 of 30) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  5245
Name:  ? Bradi3g42532 Secondary Identifier:  ? PAC:32821468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42532 0.5kb upstream 0.5kb upstream 1634 true Bd3: 43839877-43841510 Brachypodium distachyon
Bradi3g42532 0.5kb upstream 0.5kb upstream 500 false Bd3: 43841011-43841510 Brachypodium distachyon
Bradi3g42532 0.5kb downstream 0.5kb downstream 1634 true Bd3: 43839377-43841010 Brachypodium distachyon
Bradi3g42532 0.5kb downstream 0.5kb downstream 500 false Bd3: 43839377-43839876 Brachypodium distachyon
Bradi3g42532 1.0kb upstream 1.0kb upstream 2134 true Bd3: 43839877-43842010 Brachypodium distachyon
Bradi3g42532 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43841011-43842010 Brachypodium distachyon
Bradi3g42532 1.0kb downstream 1.0kb downstream 2134 true Bd3: 43838877-43841010 Brachypodium distachyon
Bradi3g42532 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43838877-43839876 Brachypodium distachyon
Bradi3g42532 2.0kb upstream 2.0kb upstream 3134 true Bd3: 43839877-43843010 Brachypodium distachyon
Bradi3g42532 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43841011-43843010 Brachypodium distachyon
Bradi3g42532 2.0kb downstream 2.0kb downstream 3134 true Bd3: 43837877-43841010 Brachypodium distachyon
Bradi3g42532 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43837877-43839876 Brachypodium distachyon
Bradi3g42532 5.0kb upstream 5.0kb upstream 6134 true Bd3: 43839877-43846010 Brachypodium distachyon
Bradi3g42532 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43841011-43846010 Brachypodium distachyon
Bradi3g42532 5.0kb downstream 5.0kb downstream 6134 true Bd3: 43834877-43841010 Brachypodium distachyon
Bradi3g42532 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43834877-43839876 Brachypodium distachyon
Bradi3g42532 10.0kb upstream 10.0kb upstream 11134 true Bd3: 43839877-43851010 Brachypodium distachyon
Bradi3g42532 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43841011-43851010 Brachypodium distachyon
Bradi3g42532 10.0kb downstream 10.0kb downstream 11134 true Bd3: 43829877-43841010 Brachypodium distachyon
Bradi3g42532 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43829877-43839876 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587862 5269 Grass View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low Low
cufflinks 0.195        
cufflinks 0.232        
cufflinks 0.452        
cufflinks 0.441        
cufflinks 0.139        
cufflinks 0.213        
cufflinks 0.26        
cufflinks 0.156        
cufflinks 0.108        
cufflinks 0.121        
cufflinks 0.18        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.148        
cufflinks 0.277        
cufflinks 0.709        
cufflinks 3.862       High
cufflinks 0.059     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.152       High
cufflinks 0.054     Low Low
cufflinks 0.115        
cufflinks 0.257        
cufflinks 0.404        
cufflinks 0.38        
cufflinks 0.043     Low Low
cufflinks 0.227        
cufflinks 0.377        
cufflinks 1.56       High

0 Strain