Gene : Bradi3g42470 B. distachyon v3.1
Defline:  (1 of 30) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  5237
Name:  ? Bradi3g42470 Secondary Identifier:  ? PAC:32812904
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42470 0.5kb upstream 0.5kb upstream 1479 true Bd3: 43821978-43823456 Brachypodium distachyon
Bradi3g42470 0.5kb upstream 0.5kb upstream 500 false Bd3: 43821978-43822477 Brachypodium distachyon
Bradi3g42470 0.5kb downstream 0.5kb downstream 1479 true Bd3: 43822478-43823956 Brachypodium distachyon
Bradi3g42470 0.5kb downstream 0.5kb downstream 500 false Bd3: 43823457-43823956 Brachypodium distachyon
Bradi3g42470 1.0kb upstream 1.0kb upstream 1979 true Bd3: 43821478-43823456 Brachypodium distachyon
Bradi3g42470 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43821478-43822477 Brachypodium distachyon
Bradi3g42470 1.0kb downstream 1.0kb downstream 1979 true Bd3: 43822478-43824456 Brachypodium distachyon
Bradi3g42470 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43823457-43824456 Brachypodium distachyon
Bradi3g42470 2.0kb upstream 2.0kb upstream 2979 true Bd3: 43820478-43823456 Brachypodium distachyon
Bradi3g42470 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43820478-43822477 Brachypodium distachyon
Bradi3g42470 2.0kb downstream 2.0kb downstream 2979 true Bd3: 43822478-43825456 Brachypodium distachyon
Bradi3g42470 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43823457-43825456 Brachypodium distachyon
Bradi3g42470 5.0kb upstream 5.0kb upstream 5979 true Bd3: 43817478-43823456 Brachypodium distachyon
Bradi3g42470 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43817478-43822477 Brachypodium distachyon
Bradi3g42470 5.0kb downstream 5.0kb downstream 5979 true Bd3: 43822478-43828456 Brachypodium distachyon
Bradi3g42470 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43823457-43828456 Brachypodium distachyon
Bradi3g42470 10.0kb upstream 10.0kb upstream 10979 true Bd3: 43812478-43823456 Brachypodium distachyon
Bradi3g42470 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43812478-43822477 Brachypodium distachyon
Bradi3g42470 10.0kb downstream 10.0kb downstream 10979 true Bd3: 43822478-43833456 Brachypodium distachyon
Bradi3g42470 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43823457-43833456 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587862 5269 Grass View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.16        
cufflinks 0.108       Low
cufflinks 0.2        
cufflinks 0.391        
cufflinks 0.078     Low Low
cufflinks 0.197        
cufflinks 0.097       Low
cufflinks 0.337        
cufflinks 0.386        
cufflinks 0.471        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.175        
cufflinks 0.192        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.273       High
cufflinks 0.358        
cufflinks 0.483        
cufflinks 1.422       High
cufflinks 0.271        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.929       High
cufflinks 0.311        
cufflinks 0.216        
cufflinks 0.149       Low
cufflinks 0.209        
cufflinks 0.332        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.613        
cufflinks 0.392        
cufflinks 0.608        

0 Strain