Gene : Bradi3g42680 B. distachyon v3.1
Defline:  (1 of 1) 3.1.3.64//3.1.3.95 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase // Phosphatidylinositol-3,5-bisphosphate 3-phosphatase / PtdIns-3,5-P(2) 3-Ptase Genomic Order:  5260
Name:  ? Bradi3g42680 Secondary Identifier:  ? PAC:32818776
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6367 Brachypodium distachyon pathologic  
Bdistachyon PWY-6368 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42680 0.5kb upstream 0.5kb upstream 9277 true Bd3: 43911927-43921203 Brachypodium distachyon
Bradi3g42680 0.5kb upstream 0.5kb upstream 500 false Bd3: 43920704-43921203 Brachypodium distachyon
Bradi3g42680 0.5kb downstream 0.5kb downstream 9277 true Bd3: 43911427-43920703 Brachypodium distachyon
Bradi3g42680 0.5kb downstream 0.5kb downstream 500 false Bd3: 43911427-43911926 Brachypodium distachyon
Bradi3g42680 1.0kb upstream 1.0kb upstream 9777 true Bd3: 43911927-43921703 Brachypodium distachyon
Bradi3g42680 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43920704-43921703 Brachypodium distachyon
Bradi3g42680 1.0kb downstream 1.0kb downstream 9777 true Bd3: 43910927-43920703 Brachypodium distachyon
Bradi3g42680 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43910927-43911926 Brachypodium distachyon
Bradi3g42680 2.0kb upstream 2.0kb upstream 10777 true Bd3: 43911927-43922703 Brachypodium distachyon
Bradi3g42680 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43920704-43922703 Brachypodium distachyon
Bradi3g42680 2.0kb downstream 2.0kb downstream 10777 true Bd3: 43909927-43920703 Brachypodium distachyon
Bradi3g42680 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43909927-43911926 Brachypodium distachyon
Bradi3g42680 5.0kb upstream 5.0kb upstream 13777 true Bd3: 43911927-43925703 Brachypodium distachyon
Bradi3g42680 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43920704-43925703 Brachypodium distachyon
Bradi3g42680 5.0kb downstream 5.0kb downstream 13777 true Bd3: 43906927-43920703 Brachypodium distachyon
Bradi3g42680 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43906927-43911926 Brachypodium distachyon
Bradi3g42680 10.0kb upstream 10.0kb upstream 18777 true Bd3: 43911927-43930703 Brachypodium distachyon
Bradi3g42680 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43920704-43930703 Brachypodium distachyon
Bradi3g42680 10.0kb downstream 10.0kb downstream 18777 true Bd3: 43901927-43920703 Brachypodium distachyon
Bradi3g42680 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43901927-43911926 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570389 5269 Grass View MSA
122047455 5273 Angiosperm View MSA
121350859 5274 Embryophyte View MSA
123381910 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.611        
cufflinks 3.506        
cufflinks 4.399        
cufflinks 2.919        
cufflinks 2.11       Low
cufflinks 3.339        
cufflinks 3.278        
cufflinks 3.257        
cufflinks 3.64        
cufflinks 3.692        
cufflinks 4.928       High
cufflinks 3.645        
cufflinks 3.525        
cufflinks 3.375        
cufflinks 2.92        
cufflinks 3.556        
cufflinks 2.534        
cufflinks 5.792       High
cufflinks 3.92        
cufflinks 2.448        
cufflinks 2.17       Low
cufflinks 5.58       High
cufflinks 3.12        
cufflinks 3.0        
cufflinks 2.692        
cufflinks 4.345        
cufflinks 4.357        
cufflinks 4.593       High
cufflinks 4.389        
cufflinks 2.866        

0 Strain