Gene : Bradi3g42750 B. distachyon v3.1
Defline:  (1 of 1) K12736 - peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8] (PPWD1) Genomic Order:  5271
Name:  ? Bradi3g42750 Secondary Identifier:  ? PAC:32820179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42750 0.5kb upstream 0.5kb upstream 6110 true Bd3: 43962794-43968903 Brachypodium distachyon
Bradi3g42750 0.5kb upstream 0.5kb upstream 500 false Bd3: 43962794-43963293 Brachypodium distachyon
Bradi3g42750 0.5kb downstream 0.5kb downstream 6110 true Bd3: 43963294-43969403 Brachypodium distachyon
Bradi3g42750 0.5kb downstream 0.5kb downstream 500 false Bd3: 43968904-43969403 Brachypodium distachyon
Bradi3g42750 1.0kb upstream 1.0kb upstream 6610 true Bd3: 43962294-43968903 Brachypodium distachyon
Bradi3g42750 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43962294-43963293 Brachypodium distachyon
Bradi3g42750 1.0kb downstream 1.0kb downstream 6610 true Bd3: 43963294-43969903 Brachypodium distachyon
Bradi3g42750 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43968904-43969903 Brachypodium distachyon
Bradi3g42750 2.0kb upstream 2.0kb upstream 7610 true Bd3: 43961294-43968903 Brachypodium distachyon
Bradi3g42750 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43961294-43963293 Brachypodium distachyon
Bradi3g42750 2.0kb downstream 2.0kb downstream 7610 true Bd3: 43963294-43970903 Brachypodium distachyon
Bradi3g42750 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43968904-43970903 Brachypodium distachyon
Bradi3g42750 5.0kb upstream 5.0kb upstream 10610 true Bd3: 43958294-43968903 Brachypodium distachyon
Bradi3g42750 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43958294-43963293 Brachypodium distachyon
Bradi3g42750 5.0kb downstream 5.0kb downstream 10610 true Bd3: 43963294-43973903 Brachypodium distachyon
Bradi3g42750 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43968904-43973903 Brachypodium distachyon
Bradi3g42750 10.0kb upstream 10.0kb upstream 15610 true Bd3: 43953294-43968903 Brachypodium distachyon
Bradi3g42750 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43953294-43963293 Brachypodium distachyon
Bradi3g42750 10.0kb downstream 10.0kb downstream 15610 true Bd3: 43963294-43978903 Brachypodium distachyon
Bradi3g42750 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43968904-43978903 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041059 5273 Angiosperm View MSA
124579764 5269 Grass View MSA
121344442 5274 Embryophyte View MSA
123425036 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.064        
cufflinks 8.702        
cufflinks 9.182        
cufflinks 7.622        
cufflinks 3.514       Low
cufflinks 7.695        
cufflinks 7.419        
cufflinks 6.787        
cufflinks 7.213        
cufflinks 5.548        
cufflinks 6.692        
cufflinks 7.223        
cufflinks 4.199        
cufflinks 5.409        
cufflinks 4.323        
cufflinks 7.885        
cufflinks 4.8        
cufflinks 12.802     High High
cufflinks 6.585        
cufflinks 2.383       Low
cufflinks 5.649        
cufflinks 8.466        
cufflinks 6.846        
cufflinks 6.488        
cufflinks 7.821        
cufflinks 8.349        
cufflinks 6.454        
cufflinks 8.061        
cufflinks 7.212        
cufflinks 8.1        

0 Strain