Gene : Bradi3g47340 B. distachyon v3.1
Defline:  (1 of 1) PTHR23344//PTHR23344:SF8 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-LIKE PROTEIN-RELATED Genomic Order:  5863
Name:  ? Bradi3g47340 Secondary Identifier:  ? PAC:32814709
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7409 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g47340 0.5kb upstream 0.5kb upstream 5191 true Bd3: 48726652-48731842 Brachypodium distachyon
Bradi3g47340 0.5kb upstream 0.5kb upstream 500 false Bd3: 48726652-48727151 Brachypodium distachyon
Bradi3g47340 0.5kb downstream 0.5kb downstream 5191 true Bd3: 48727152-48732342 Brachypodium distachyon
Bradi3g47340 0.5kb downstream 0.5kb downstream 500 false Bd3: 48731843-48732342 Brachypodium distachyon
Bradi3g47340 1.0kb upstream 1.0kb upstream 5691 true Bd3: 48726152-48731842 Brachypodium distachyon
Bradi3g47340 1.0kb upstream 1.0kb upstream 1000 false Bd3: 48726152-48727151 Brachypodium distachyon
Bradi3g47340 1.0kb downstream 1.0kb downstream 5691 true Bd3: 48727152-48732842 Brachypodium distachyon
Bradi3g47340 1.0kb downstream 1.0kb downstream 1000 false Bd3: 48731843-48732842 Brachypodium distachyon
Bradi3g47340 2.0kb upstream 2.0kb upstream 6691 true Bd3: 48725152-48731842 Brachypodium distachyon
Bradi3g47340 2.0kb upstream 2.0kb upstream 2000 false Bd3: 48725152-48727151 Brachypodium distachyon
Bradi3g47340 2.0kb downstream 2.0kb downstream 6691 true Bd3: 48727152-48733842 Brachypodium distachyon
Bradi3g47340 2.0kb downstream 2.0kb downstream 2000 false Bd3: 48731843-48733842 Brachypodium distachyon
Bradi3g47340 5.0kb upstream 5.0kb upstream 9691 true Bd3: 48722152-48731842 Brachypodium distachyon
Bradi3g47340 5.0kb upstream 5.0kb upstream 5000 false Bd3: 48722152-48727151 Brachypodium distachyon
Bradi3g47340 5.0kb downstream 5.0kb downstream 9691 true Bd3: 48727152-48736842 Brachypodium distachyon
Bradi3g47340 5.0kb downstream 5.0kb downstream 5000 false Bd3: 48731843-48736842 Brachypodium distachyon
Bradi3g47340 10.0kb upstream 10.0kb upstream 14691 true Bd3: 48717152-48731842 Brachypodium distachyon
Bradi3g47340 10.0kb upstream 10.0kb upstream 10000 false Bd3: 48717152-48727151 Brachypodium distachyon
Bradi3g47340 10.0kb downstream 10.0kb downstream 14691 true Bd3: 48727152-48741842 Brachypodium distachyon
Bradi3g47340 10.0kb downstream 10.0kb downstream 10000 false Bd3: 48731843-48741842 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570308 5269 Grass View MSA
122046858 5273 Angiosperm View MSA
121349950 5274 Embryophyte View MSA
123381513 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.03     High  
cufflinks 12.703     High  
cufflinks 14.378     High  
cufflinks 10.871     High  
cufflinks 6.044        
cufflinks 11.023     High  
cufflinks 10.365     High  
cufflinks 9.669     High  
cufflinks 9.764     High  
cufflinks 7.176        
cufflinks 2.059       Low
cufflinks 17.339     High  
cufflinks 1.115       Low
cufflinks 0.637       Low
cufflinks 6.812        
cufflinks 13.23     High  
cufflinks 7.662        
cufflinks 38.026     High High
cufflinks 27.669     High High
cufflinks 2.738        
cufflinks 15.423     High  
cufflinks 13.223     High  
cufflinks 8.493        
cufflinks 9.23        
cufflinks 8.397        
cufflinks 12.192     High  
cufflinks 0.605       Low
cufflinks 10.998     High  
cufflinks 11.494     High  
cufflinks 25.54     High High

0 Strain