Gene : Bradi4g30297 B. distachyon v3.1
Defline:  (1 of 5) PF14709 - double strand RNA binding domain from DEAD END PROTEIN 1 (DND1_DSRM) Genomic Order:  3897
Name:  ? Bradi4g30297 Secondary Identifier:  ? PAC:32789870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g30297 0.5kb upstream 0.5kb upstream 7681 true Bd4: 35912120-35919800 Brachypodium distachyon
Bradi4g30297 0.5kb upstream 0.5kb upstream 500 false Bd4: 35912120-35912619 Brachypodium distachyon
Bradi4g30297 0.5kb downstream 0.5kb downstream 7681 true Bd4: 35912620-35920300 Brachypodium distachyon
Bradi4g30297 0.5kb downstream 0.5kb downstream 500 false Bd4: 35919801-35920300 Brachypodium distachyon
Bradi4g30297 1.0kb upstream 1.0kb upstream 8181 true Bd4: 35911620-35919800 Brachypodium distachyon
Bradi4g30297 1.0kb upstream 1.0kb upstream 1000 false Bd4: 35911620-35912619 Brachypodium distachyon
Bradi4g30297 1.0kb downstream 1.0kb downstream 8181 true Bd4: 35912620-35920800 Brachypodium distachyon
Bradi4g30297 1.0kb downstream 1.0kb downstream 1000 false Bd4: 35919801-35920800 Brachypodium distachyon
Bradi4g30297 2.0kb upstream 2.0kb upstream 9181 true Bd4: 35910620-35919800 Brachypodium distachyon
Bradi4g30297 2.0kb upstream 2.0kb upstream 2000 false Bd4: 35910620-35912619 Brachypodium distachyon
Bradi4g30297 2.0kb downstream 2.0kb downstream 9181 true Bd4: 35912620-35921800 Brachypodium distachyon
Bradi4g30297 2.0kb downstream 2.0kb downstream 2000 false Bd4: 35919801-35921800 Brachypodium distachyon
Bradi4g30297 5.0kb upstream 5.0kb upstream 12181 true Bd4: 35907620-35919800 Brachypodium distachyon
Bradi4g30297 5.0kb upstream 5.0kb upstream 5000 false Bd4: 35907620-35912619 Brachypodium distachyon
Bradi4g30297 5.0kb downstream 5.0kb downstream 12181 true Bd4: 35912620-35924800 Brachypodium distachyon
Bradi4g30297 5.0kb downstream 5.0kb downstream 5000 false Bd4: 35919801-35924800 Brachypodium distachyon
Bradi4g30297 10.0kb upstream 10.0kb upstream 17181 true Bd4: 35902620-35919800 Brachypodium distachyon
Bradi4g30297 10.0kb upstream 10.0kb upstream 10000 false Bd4: 35902620-35912619 Brachypodium distachyon
Bradi4g30297 10.0kb downstream 10.0kb downstream 17181 true Bd4: 35912620-35929800 Brachypodium distachyon
Bradi4g30297 10.0kb downstream 10.0kb downstream 10000 false Bd4: 35919801-35929800 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028050 5273 Angiosperm View MSA
124590541 5269 Grass View MSA
121297597 5274 Embryophyte View MSA
123335637 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.2       Low
cufflinks 0.457        
cufflinks 0.453        
cufflinks 0.553       High
cufflinks 0.181       Low
cufflinks 0.37        
cufflinks 0.392        
cufflinks 0.35        
cufflinks 0.398        
cufflinks 0.491        
cufflinks 0.449        
cufflinks 0.35        
cufflinks 0.402        
cufflinks 0.35        
cufflinks 0.264        
cufflinks 0.449        
cufflinks 0.44        
cufflinks 0.234        
cufflinks 0.319        
cufflinks 0.052     Low Low
cufflinks 0.34        
cufflinks 0.44        
cufflinks 0.368        
cufflinks 0.39        
cufflinks 0.422        
cufflinks 0.555       High
cufflinks 0.294        
cufflinks 0.501        
cufflinks 0.426        
cufflinks 0.263        

0 Strain