Gene : Bradi3g47671 B. distachyon v3.1
Defline:  (1 of 1) PF03879 - Cgr1 family (Cgr1) Genomic Order:  5915
Name:  ? Bradi3g47671 Secondary Identifier:  ? PAC:32817544
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g47671 0.5kb upstream 0.5kb upstream 1423 true Bd3: 49054877-49056299 Brachypodium distachyon
Bradi3g47671 0.5kb upstream 0.5kb upstream 500 false Bd3: 49055800-49056299 Brachypodium distachyon
Bradi3g47671 0.5kb downstream 0.5kb downstream 1423 true Bd3: 49054377-49055799 Brachypodium distachyon
Bradi3g47671 0.5kb downstream 0.5kb downstream 500 false Bd3: 49054377-49054876 Brachypodium distachyon
Bradi3g47671 1.0kb upstream 1.0kb upstream 1923 true Bd3: 49054877-49056799 Brachypodium distachyon
Bradi3g47671 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49055800-49056799 Brachypodium distachyon
Bradi3g47671 1.0kb downstream 1.0kb downstream 1923 true Bd3: 49053877-49055799 Brachypodium distachyon
Bradi3g47671 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49053877-49054876 Brachypodium distachyon
Bradi3g47671 2.0kb upstream 2.0kb upstream 2923 true Bd3: 49054877-49057799 Brachypodium distachyon
Bradi3g47671 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49055800-49057799 Brachypodium distachyon
Bradi3g47671 2.0kb downstream 2.0kb downstream 2923 true Bd3: 49052877-49055799 Brachypodium distachyon
Bradi3g47671 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49052877-49054876 Brachypodium distachyon
Bradi3g47671 5.0kb upstream 5.0kb upstream 5923 true Bd3: 49054877-49060799 Brachypodium distachyon
Bradi3g47671 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49055800-49060799 Brachypodium distachyon
Bradi3g47671 5.0kb downstream 5.0kb downstream 5923 true Bd3: 49049877-49055799 Brachypodium distachyon
Bradi3g47671 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49049877-49054876 Brachypodium distachyon
Bradi3g47671 10.0kb upstream 10.0kb upstream 10923 true Bd3: 49054877-49065799 Brachypodium distachyon
Bradi3g47671 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49055800-49065799 Brachypodium distachyon
Bradi3g47671 10.0kb downstream 10.0kb downstream 10923 true Bd3: 49044877-49055799 Brachypodium distachyon
Bradi3g47671 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49044877-49054876 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573962 5269 Grass View MSA
122044383 5273 Angiosperm View MSA
121348750 5274 Embryophyte View MSA
123426387 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.412     High  
cufflinks 17.349     High  
cufflinks 17.205     High  
cufflinks 21.898     High  
cufflinks 10.708     High  
cufflinks 17.467     High  
cufflinks 19.787     High  
cufflinks 14.145     High  
cufflinks 17.417     High  
cufflinks 25.379     High  
cufflinks 9.742     High Low
cufflinks 8.226       Low
cufflinks 5.744       Low
cufflinks 7.217       Low
cufflinks 11.132     High  
cufflinks 17.147     High  
cufflinks 24.336     High  
cufflinks 22.213     High  
cufflinks 23.982     High  
cufflinks 39.51     High High
cufflinks 33.823     High High
cufflinks 14.957     High  
cufflinks 16.221     High  
cufflinks 16.838     High  
cufflinks 22.666     High  
cufflinks 19.524     High  
cufflinks 8.501       Low
cufflinks 25.855     High  
cufflinks 25.115     High  
cufflinks 19.182     High  

0 Strain