Gene : Bradi3g48010 B. distachyon v3.1
Defline:  (1 of 1) PTHR13068:SF9 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  5957
Name:  ? Bradi3g48010 Secondary Identifier:  ? PAC:32812205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g48010 0.5kb upstream 0.5kb upstream 3509 true Bd3: 49326333-49329841 Brachypodium distachyon
Bradi3g48010 0.5kb upstream 0.5kb upstream 500 false Bd3: 49326333-49326832 Brachypodium distachyon
Bradi3g48010 0.5kb downstream 0.5kb downstream 3509 true Bd3: 49326833-49330341 Brachypodium distachyon
Bradi3g48010 0.5kb downstream 0.5kb downstream 500 false Bd3: 49329842-49330341 Brachypodium distachyon
Bradi3g48010 1.0kb upstream 1.0kb upstream 4009 true Bd3: 49325833-49329841 Brachypodium distachyon
Bradi3g48010 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49325833-49326832 Brachypodium distachyon
Bradi3g48010 1.0kb downstream 1.0kb downstream 4009 true Bd3: 49326833-49330841 Brachypodium distachyon
Bradi3g48010 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49329842-49330841 Brachypodium distachyon
Bradi3g48010 2.0kb upstream 2.0kb upstream 5009 true Bd3: 49324833-49329841 Brachypodium distachyon
Bradi3g48010 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49324833-49326832 Brachypodium distachyon
Bradi3g48010 2.0kb downstream 2.0kb downstream 5009 true Bd3: 49326833-49331841 Brachypodium distachyon
Bradi3g48010 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49329842-49331841 Brachypodium distachyon
Bradi3g48010 5.0kb upstream 5.0kb upstream 8009 true Bd3: 49321833-49329841 Brachypodium distachyon
Bradi3g48010 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49321833-49326832 Brachypodium distachyon
Bradi3g48010 5.0kb downstream 5.0kb downstream 8009 true Bd3: 49326833-49334841 Brachypodium distachyon
Bradi3g48010 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49329842-49334841 Brachypodium distachyon
Bradi3g48010 10.0kb upstream 10.0kb upstream 13009 true Bd3: 49316833-49329841 Brachypodium distachyon
Bradi3g48010 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49316833-49326832 Brachypodium distachyon
Bradi3g48010 10.0kb downstream 10.0kb downstream 13009 true Bd3: 49326833-49339841 Brachypodium distachyon
Bradi3g48010 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49329842-49339841 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577844 5269 Grass View MSA
122042803 5273 Angiosperm View MSA
121347478 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.48     High High
cufflinks 11.177     High High
cufflinks 7.625        
cufflinks 9.376        
cufflinks 2.37       Low
cufflinks 8.763        
cufflinks 9.314        
cufflinks 5.59        
cufflinks 6.6        
cufflinks 4.624        
cufflinks 2.966        
cufflinks 5.987        
cufflinks 2.881        
cufflinks 3.576        
cufflinks 5.059        
cufflinks 10.882     High High
cufflinks 3.59        
cufflinks 2.748        
cufflinks 1.529       Low
cufflinks 0.991       Low
cufflinks 4.668        
cufflinks 5.632        
cufflinks 4.616        
cufflinks 6.571        
cufflinks 9.556        
cufflinks 7.077        
cufflinks 2.891        
cufflinks 6.327        
cufflinks 6.355        
cufflinks 8.207        

0 Strain