Gene : Bradi3g48567 B. distachyon v3.1
Defline:  (1 of 2) PTHR14499//PTHR14499:SF75 - POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING Genomic Order:  6026
Name:  ? Bradi3g48567 Secondary Identifier:  ? PAC:32812588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g48567 0.5kb upstream 0.5kb upstream 1907 true Bd3: 49747539-49749445 Brachypodium distachyon
Bradi3g48567 0.5kb upstream 0.5kb upstream 500 false Bd3: 49748946-49749445 Brachypodium distachyon
Bradi3g48567 0.5kb downstream 0.5kb downstream 1907 true Bd3: 49747039-49748945 Brachypodium distachyon
Bradi3g48567 0.5kb downstream 0.5kb downstream 500 false Bd3: 49747039-49747538 Brachypodium distachyon
Bradi3g48567 1.0kb upstream 1.0kb upstream 2407 true Bd3: 49747539-49749945 Brachypodium distachyon
Bradi3g48567 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49748946-49749945 Brachypodium distachyon
Bradi3g48567 1.0kb downstream 1.0kb downstream 2407 true Bd3: 49746539-49748945 Brachypodium distachyon
Bradi3g48567 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49746539-49747538 Brachypodium distachyon
Bradi3g48567 2.0kb upstream 2.0kb upstream 3407 true Bd3: 49747539-49750945 Brachypodium distachyon
Bradi3g48567 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49748946-49750945 Brachypodium distachyon
Bradi3g48567 2.0kb downstream 2.0kb downstream 3407 true Bd3: 49745539-49748945 Brachypodium distachyon
Bradi3g48567 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49745539-49747538 Brachypodium distachyon
Bradi3g48567 5.0kb upstream 5.0kb upstream 6407 true Bd3: 49747539-49753945 Brachypodium distachyon
Bradi3g48567 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49748946-49753945 Brachypodium distachyon
Bradi3g48567 5.0kb downstream 5.0kb downstream 6407 true Bd3: 49742539-49748945 Brachypodium distachyon
Bradi3g48567 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49742539-49747538 Brachypodium distachyon
Bradi3g48567 10.0kb upstream 10.0kb upstream 11407 true Bd3: 49747539-49758945 Brachypodium distachyon
Bradi3g48567 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49748946-49758945 Brachypodium distachyon
Bradi3g48567 10.0kb downstream 10.0kb downstream 11407 true Bd3: 49737539-49748945 Brachypodium distachyon
Bradi3g48567 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49737539-49747538 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572503 5269 Grass View MSA
122045449 5273 Angiosperm View MSA
121344030 5274 Embryophyte View MSA
123379962 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.59       High
cufflinks 0.256        
cufflinks 0.207        
cufflinks 0.353        
cufflinks 0.976        
cufflinks 0.336        
cufflinks 0.349        
cufflinks 0.323        
cufflinks 0.466        
cufflinks 0.401        
cufflinks 1.553       High
cufflinks 0.356        
cufflinks 0.426        
cufflinks 1.108        
cufflinks 0.347        
cufflinks 0.239        
cufflinks 0.122     Low Low
cufflinks 1.538       High
cufflinks 1.184       High
cufflinks 0.5        
cufflinks 0.643        
cufflinks 0.087     Low Low
cufflinks 0.298        
cufflinks 0.337        
cufflinks 0.424        
cufflinks 0.173        
cufflinks 0.052     Low Low
cufflinks 0.508        
cufflinks 0.602        
cufflinks 0.545        

0 Strain