Gene : Bradi3g48610 B. distachyon v3.1
Defline:  (1 of 3) PTHR12294 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  6031
Name:  ? Bradi3g48610 Secondary Identifier:  ? PAC:32819444
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g48610 0.5kb upstream 0.5kb upstream 6532 true Bd3: 49769024-49775555 Brachypodium distachyon
Bradi3g48610 0.5kb upstream 0.5kb upstream 500 false Bd3: 49769024-49769523 Brachypodium distachyon
Bradi3g48610 0.5kb downstream 0.5kb downstream 6532 true Bd3: 49769524-49776055 Brachypodium distachyon
Bradi3g48610 0.5kb downstream 0.5kb downstream 500 false Bd3: 49775556-49776055 Brachypodium distachyon
Bradi3g48610 1.0kb upstream 1.0kb upstream 7032 true Bd3: 49768524-49775555 Brachypodium distachyon
Bradi3g48610 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49768524-49769523 Brachypodium distachyon
Bradi3g48610 1.0kb downstream 1.0kb downstream 7032 true Bd3: 49769524-49776555 Brachypodium distachyon
Bradi3g48610 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49775556-49776555 Brachypodium distachyon
Bradi3g48610 2.0kb upstream 2.0kb upstream 8032 true Bd3: 49767524-49775555 Brachypodium distachyon
Bradi3g48610 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49767524-49769523 Brachypodium distachyon
Bradi3g48610 2.0kb downstream 2.0kb downstream 8032 true Bd3: 49769524-49777555 Brachypodium distachyon
Bradi3g48610 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49775556-49777555 Brachypodium distachyon
Bradi3g48610 5.0kb upstream 5.0kb upstream 11032 true Bd3: 49764524-49775555 Brachypodium distachyon
Bradi3g48610 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49764524-49769523 Brachypodium distachyon
Bradi3g48610 5.0kb downstream 5.0kb downstream 11032 true Bd3: 49769524-49780555 Brachypodium distachyon
Bradi3g48610 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49775556-49780555 Brachypodium distachyon
Bradi3g48610 10.0kb upstream 10.0kb upstream 16032 true Bd3: 49759524-49775555 Brachypodium distachyon
Bradi3g48610 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49759524-49769523 Brachypodium distachyon
Bradi3g48610 10.0kb downstream 10.0kb downstream 16032 true Bd3: 49769524-49785555 Brachypodium distachyon
Bradi3g48610 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49775556-49785555 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577420 5269 Grass View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.753        
cufflinks 2.926        
cufflinks 3.452        
cufflinks 4.011        
cufflinks 7.301        
cufflinks 2.488        
cufflinks 2.757        
cufflinks 5.465        
cufflinks 3.748        
cufflinks 5.458        
cufflinks 6.387        
cufflinks 3.991        
cufflinks 5.768        
cufflinks 7.636       High
cufflinks 8.252       High
cufflinks 3.033        
cufflinks 5.787        
cufflinks 0.394       Low
cufflinks 3.285        
cufflinks 3.541        
cufflinks 1.148       Low
cufflinks 5.129        
cufflinks 5.741        
cufflinks 3.761        
cufflinks 3.175        
cufflinks 4.295        
cufflinks 2.681        
cufflinks 4.968        
cufflinks 4.433        
cufflinks 0.962       Low

0 Strain