Gene : Bradi3g48780 B. distachyon v3.1
Defline:  (1 of 11) PTHR24420//PTHR24420:SF937 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE Genomic Order:  6056
Name:  ? Bradi3g48780 Secondary Identifier:  ? PAC:32818241
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g48780 0.5kb upstream 0.5kb upstream 1151 true Bd3: 49955690-49956840 Brachypodium distachyon
Bradi3g48780 0.5kb upstream 0.5kb upstream 500 false Bd3: 49955690-49956189 Brachypodium distachyon
Bradi3g48780 0.5kb downstream 0.5kb downstream 1151 true Bd3: 49956190-49957340 Brachypodium distachyon
Bradi3g48780 0.5kb downstream 0.5kb downstream 500 false Bd3: 49956841-49957340 Brachypodium distachyon
Bradi3g48780 1.0kb upstream 1.0kb upstream 1651 true Bd3: 49955190-49956840 Brachypodium distachyon
Bradi3g48780 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49955190-49956189 Brachypodium distachyon
Bradi3g48780 1.0kb downstream 1.0kb downstream 1651 true Bd3: 49956190-49957840 Brachypodium distachyon
Bradi3g48780 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49956841-49957840 Brachypodium distachyon
Bradi3g48780 2.0kb upstream 2.0kb upstream 2651 true Bd3: 49954190-49956840 Brachypodium distachyon
Bradi3g48780 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49954190-49956189 Brachypodium distachyon
Bradi3g48780 2.0kb downstream 2.0kb downstream 2651 true Bd3: 49956190-49958840 Brachypodium distachyon
Bradi3g48780 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49956841-49958840 Brachypodium distachyon
Bradi3g48780 5.0kb upstream 5.0kb upstream 5651 true Bd3: 49951190-49956840 Brachypodium distachyon
Bradi3g48780 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49951190-49956189 Brachypodium distachyon
Bradi3g48780 5.0kb downstream 5.0kb downstream 5651 true Bd3: 49956190-49961840 Brachypodium distachyon
Bradi3g48780 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49956841-49961840 Brachypodium distachyon
Bradi3g48780 10.0kb upstream 10.0kb upstream 10651 true Bd3: 49946190-49956840 Brachypodium distachyon
Bradi3g48780 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49946190-49956189 Brachypodium distachyon
Bradi3g48780 10.0kb downstream 10.0kb downstream 10651 true Bd3: 49956190-49966840 Brachypodium distachyon
Bradi3g48780 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49956841-49966840 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590516 5269 Grass View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.237        
cufflinks 3.469        
cufflinks 2.308        
cufflinks 3.657        
cufflinks 1.429        
cufflinks 4.27        
cufflinks 5.058        
cufflinks 2.653        
cufflinks 3.446        
cufflinks 2.328        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.885        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.423        
cufflinks 2.603        
cufflinks 0.965        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.542        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.932        
cufflinks 1.982        
cufflinks 3.273        
cufflinks 3.008        
cufflinks 5.073        
cufflinks 1.636        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.4        
cufflinks 2.811        
cufflinks 8.381       High

0 Strain