Gene : Bradi3g48710 B. distachyon v3.1
Defline:  (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) Genomic Order:  6043
Name:  ? Bradi3g48710 Secondary Identifier:  ? PAC:32823466
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g48710 0.5kb upstream 0.5kb upstream 2767 true Bd3: 49851362-49854128 Brachypodium distachyon
Bradi3g48710 0.5kb upstream 0.5kb upstream 500 false Bd3: 49851362-49851861 Brachypodium distachyon
Bradi3g48710 0.5kb downstream 0.5kb downstream 2767 true Bd3: 49851862-49854628 Brachypodium distachyon
Bradi3g48710 0.5kb downstream 0.5kb downstream 500 false Bd3: 49854129-49854628 Brachypodium distachyon
Bradi3g48710 1.0kb upstream 1.0kb upstream 3267 true Bd3: 49850862-49854128 Brachypodium distachyon
Bradi3g48710 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49850862-49851861 Brachypodium distachyon
Bradi3g48710 1.0kb downstream 1.0kb downstream 3267 true Bd3: 49851862-49855128 Brachypodium distachyon
Bradi3g48710 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49854129-49855128 Brachypodium distachyon
Bradi3g48710 2.0kb upstream 2.0kb upstream 4267 true Bd3: 49849862-49854128 Brachypodium distachyon
Bradi3g48710 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49849862-49851861 Brachypodium distachyon
Bradi3g48710 2.0kb downstream 2.0kb downstream 4267 true Bd3: 49851862-49856128 Brachypodium distachyon
Bradi3g48710 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49854129-49856128 Brachypodium distachyon
Bradi3g48710 5.0kb upstream 5.0kb upstream 7267 true Bd3: 49846862-49854128 Brachypodium distachyon
Bradi3g48710 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49846862-49851861 Brachypodium distachyon
Bradi3g48710 5.0kb downstream 5.0kb downstream 7267 true Bd3: 49851862-49859128 Brachypodium distachyon
Bradi3g48710 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49854129-49859128 Brachypodium distachyon
Bradi3g48710 10.0kb upstream 10.0kb upstream 12267 true Bd3: 49841862-49854128 Brachypodium distachyon
Bradi3g48710 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49841862-49851861 Brachypodium distachyon
Bradi3g48710 10.0kb downstream 10.0kb downstream 12267 true Bd3: 49851862-49864128 Brachypodium distachyon
Bradi3g48710 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49854129-49864128 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589976 5269 Grass View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.935     High  
cufflinks 48.15     High High
cufflinks 33.018     High  
cufflinks 37.961     High  
cufflinks 12.718     High Low
cufflinks 42.291     High High
cufflinks 46.125     High High
cufflinks 30.891     High  
cufflinks 33.599     High  
cufflinks 23.084     High  
cufflinks 25.258     High  
cufflinks 32.811     High  
cufflinks 24.655     High  
cufflinks 28.894     High  
cufflinks 19.661     High  
cufflinks 42.601     High High
cufflinks 31.033     High  
cufflinks 15.832     High Low
cufflinks 23.095     High  
cufflinks 5.808       Low
cufflinks 35.573     High  
cufflinks 25.196     High  
cufflinks 26.11     High  
cufflinks 35.104     High  
cufflinks 42.107     High High
cufflinks 30.994     High  
cufflinks 30.242     High  
cufflinks 30.152     High  
cufflinks 28.059     High  
cufflinks 33.856     High  

0 Strain