Gene : Bradi4g30320 B. distachyon v3.1
Defline:  (1 of 1) PTHR21094:SF1 - GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-1 Genomic Order:  3899
Name:  ? Bradi4g30320 Secondary Identifier:  ? PAC:32790879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g30320 0.5kb upstream 0.5kb upstream 4425 true Bd4: 35928306-35932730 Brachypodium distachyon
Bradi4g30320 0.5kb upstream 0.5kb upstream 500 false Bd4: 35932231-35932730 Brachypodium distachyon
Bradi4g30320 0.5kb downstream 0.5kb downstream 4425 true Bd4: 35927806-35932230 Brachypodium distachyon
Bradi4g30320 0.5kb downstream 0.5kb downstream 500 false Bd4: 35927806-35928305 Brachypodium distachyon
Bradi4g30320 1.0kb upstream 1.0kb upstream 4925 true Bd4: 35928306-35933230 Brachypodium distachyon
Bradi4g30320 1.0kb upstream 1.0kb upstream 1000 false Bd4: 35932231-35933230 Brachypodium distachyon
Bradi4g30320 1.0kb downstream 1.0kb downstream 4925 true Bd4: 35927306-35932230 Brachypodium distachyon
Bradi4g30320 1.0kb downstream 1.0kb downstream 1000 false Bd4: 35927306-35928305 Brachypodium distachyon
Bradi4g30320 2.0kb upstream 2.0kb upstream 5925 true Bd4: 35928306-35934230 Brachypodium distachyon
Bradi4g30320 2.0kb upstream 2.0kb upstream 2000 false Bd4: 35932231-35934230 Brachypodium distachyon
Bradi4g30320 2.0kb downstream 2.0kb downstream 5925 true Bd4: 35926306-35932230 Brachypodium distachyon
Bradi4g30320 2.0kb downstream 2.0kb downstream 2000 false Bd4: 35926306-35928305 Brachypodium distachyon
Bradi4g30320 5.0kb upstream 5.0kb upstream 8925 true Bd4: 35928306-35937230 Brachypodium distachyon
Bradi4g30320 5.0kb upstream 5.0kb upstream 5000 false Bd4: 35932231-35937230 Brachypodium distachyon
Bradi4g30320 5.0kb downstream 5.0kb downstream 8925 true Bd4: 35923306-35932230 Brachypodium distachyon
Bradi4g30320 5.0kb downstream 5.0kb downstream 5000 false Bd4: 35923306-35928305 Brachypodium distachyon
Bradi4g30320 10.0kb upstream 10.0kb upstream 13925 true Bd4: 35928306-35942230 Brachypodium distachyon
Bradi4g30320 10.0kb upstream 10.0kb upstream 10000 false Bd4: 35932231-35942230 Brachypodium distachyon
Bradi4g30320 10.0kb downstream 10.0kb downstream 13925 true Bd4: 35918306-35932230 Brachypodium distachyon
Bradi4g30320 10.0kb downstream 10.0kb downstream 10000 false Bd4: 35918306-35928305 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589926 5269 Grass View MSA
122044900 5273 Angiosperm View MSA
121348787 5274 Embryophyte View MSA
123427960 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.008        
cufflinks 3.377        
cufflinks 3.815        
cufflinks 3.265        
cufflinks 4.462        
cufflinks 3.516        
cufflinks 3.902        
cufflinks 4.153        
cufflinks 3.777        
cufflinks 3.247        
cufflinks 3.696        
cufflinks 3.621        
cufflinks 3.275        
cufflinks 2.642       Low
cufflinks 4.555        
cufflinks 3.711        
cufflinks 4.454        
cufflinks 7.057       High
cufflinks 5.625       High
cufflinks 2.648       Low
cufflinks 8.129       High
cufflinks 3.812        
cufflinks 4.068        
cufflinks 4.004        
cufflinks 3.683        
cufflinks 3.594        
cufflinks 3.928        
cufflinks 3.582        
cufflinks 3.119        
cufflinks 6.14       High

0 Strain