Gene : Bradi3g48740 B. distachyon v3.1
Defline:  (1 of 1) PTHR12864//PTHR12864:SF23 - RAN BINDING PROTEIN 9-RELATED Genomic Order:  6046
Name:  ? Bradi3g48740 Secondary Identifier:  ? PAC:32821057
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g48740 0.5kb upstream 0.5kb upstream 2981 true Bd3: 49866956-49869936 Brachypodium distachyon
Bradi3g48740 0.5kb upstream 0.5kb upstream 500 false Bd3: 49869437-49869936 Brachypodium distachyon
Bradi3g48740 0.5kb downstream 0.5kb downstream 2981 true Bd3: 49866456-49869436 Brachypodium distachyon
Bradi3g48740 0.5kb downstream 0.5kb downstream 500 false Bd3: 49866456-49866955 Brachypodium distachyon
Bradi3g48740 1.0kb upstream 1.0kb upstream 3481 true Bd3: 49866956-49870436 Brachypodium distachyon
Bradi3g48740 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49869437-49870436 Brachypodium distachyon
Bradi3g48740 1.0kb downstream 1.0kb downstream 3481 true Bd3: 49865956-49869436 Brachypodium distachyon
Bradi3g48740 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49865956-49866955 Brachypodium distachyon
Bradi3g48740 2.0kb upstream 2.0kb upstream 4481 true Bd3: 49866956-49871436 Brachypodium distachyon
Bradi3g48740 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49869437-49871436 Brachypodium distachyon
Bradi3g48740 2.0kb downstream 2.0kb downstream 4481 true Bd3: 49864956-49869436 Brachypodium distachyon
Bradi3g48740 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49864956-49866955 Brachypodium distachyon
Bradi3g48740 5.0kb upstream 5.0kb upstream 7481 true Bd3: 49866956-49874436 Brachypodium distachyon
Bradi3g48740 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49869437-49874436 Brachypodium distachyon
Bradi3g48740 5.0kb downstream 5.0kb downstream 7481 true Bd3: 49861956-49869436 Brachypodium distachyon
Bradi3g48740 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49861956-49866955 Brachypodium distachyon
Bradi3g48740 10.0kb upstream 10.0kb upstream 12481 true Bd3: 49866956-49879436 Brachypodium distachyon
Bradi3g48740 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49869437-49879436 Brachypodium distachyon
Bradi3g48740 10.0kb downstream 10.0kb downstream 12481 true Bd3: 49856956-49869436 Brachypodium distachyon
Bradi3g48740 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49856956-49866955 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572288 5269 Grass View MSA
122045013 5273 Angiosperm View MSA
121350191 5274 Embryophyte View MSA
123381613 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.035        
cufflinks 0.752       Low
cufflinks 1.332        
cufflinks 1.01        
cufflinks 0.857        
cufflinks 0.989        
cufflinks 0.858        
cufflinks 1.09        
cufflinks 1.199        
cufflinks 2.312        
cufflinks 3.048        
cufflinks 0.589       Low
cufflinks 1.917        
cufflinks 3.046        
cufflinks 1.678        
cufflinks 1.001        
cufflinks 1.942        
cufflinks 3.825       High
cufflinks 4.447       High
cufflinks 17.73     High High
cufflinks 0.652       Low
cufflinks 1.246        
cufflinks 1.418        
cufflinks 1.184        
cufflinks 1.018        
cufflinks 1.2        
cufflinks 2.646        
cufflinks 1.52        
cufflinks 1.742        
cufflinks 0.453       Low

0 Strain