Gene : Bradi3g44920 B. distachyon v3.1
Defline:  (1 of 1) PTHR10072//PTHR10072:SF43 - IRON-SULFUR CLUSTER ASSEMBLY PROTEIN Genomic Order:  5561
Name:  ? Bradi3g44920 Secondary Identifier:  ? PAC:32818753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g44920 0.5kb upstream 0.5kb upstream 6771 true Bd3: 46621739-46628509 Brachypodium distachyon
Bradi3g44920 0.5kb upstream 0.5kb upstream 500 false Bd3: 46628010-46628509 Brachypodium distachyon
Bradi3g44920 0.5kb downstream 0.5kb downstream 6771 true Bd3: 46621239-46628009 Brachypodium distachyon
Bradi3g44920 0.5kb downstream 0.5kb downstream 500 false Bd3: 46621239-46621738 Brachypodium distachyon
Bradi3g44920 1.0kb upstream 1.0kb upstream 7271 true Bd3: 46621739-46629009 Brachypodium distachyon
Bradi3g44920 1.0kb upstream 1.0kb upstream 1000 false Bd3: 46628010-46629009 Brachypodium distachyon
Bradi3g44920 1.0kb downstream 1.0kb downstream 7271 true Bd3: 46620739-46628009 Brachypodium distachyon
Bradi3g44920 1.0kb downstream 1.0kb downstream 1000 false Bd3: 46620739-46621738 Brachypodium distachyon
Bradi3g44920 2.0kb upstream 2.0kb upstream 8271 true Bd3: 46621739-46630009 Brachypodium distachyon
Bradi3g44920 2.0kb upstream 2.0kb upstream 2000 false Bd3: 46628010-46630009 Brachypodium distachyon
Bradi3g44920 2.0kb downstream 2.0kb downstream 8271 true Bd3: 46619739-46628009 Brachypodium distachyon
Bradi3g44920 2.0kb downstream 2.0kb downstream 2000 false Bd3: 46619739-46621738 Brachypodium distachyon
Bradi3g44920 5.0kb upstream 5.0kb upstream 11271 true Bd3: 46621739-46633009 Brachypodium distachyon
Bradi3g44920 5.0kb upstream 5.0kb upstream 5000 false Bd3: 46628010-46633009 Brachypodium distachyon
Bradi3g44920 5.0kb downstream 5.0kb downstream 11271 true Bd3: 46616739-46628009 Brachypodium distachyon
Bradi3g44920 5.0kb downstream 5.0kb downstream 5000 false Bd3: 46616739-46621738 Brachypodium distachyon
Bradi3g44920 10.0kb upstream 10.0kb upstream 16271 true Bd3: 46621739-46638009 Brachypodium distachyon
Bradi3g44920 10.0kb upstream 10.0kb upstream 10000 false Bd3: 46628010-46638009 Brachypodium distachyon
Bradi3g44920 10.0kb downstream 10.0kb downstream 16271 true Bd3: 46611739-46628009 Brachypodium distachyon
Bradi3g44920 10.0kb downstream 10.0kb downstream 10000 false Bd3: 46611739-46621738 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568357 5269 Grass View MSA
122045201 5273 Angiosperm View MSA
121346515 5274 Embryophyte View MSA
123424374 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.233        
cufflinks 4.059        
cufflinks 3.292        
cufflinks 3.978        
cufflinks 1.865        
cufflinks 3.62        
cufflinks 3.661        
cufflinks 4.081        
cufflinks 3.536        
cufflinks 2.456        
cufflinks 4.563        
cufflinks 3.432        
cufflinks 4.333        
cufflinks 4.412        
cufflinks 3.691        
cufflinks 3.799        
cufflinks 3.154        
cufflinks 0.789       Low
cufflinks 2.838        
cufflinks 0.961       Low
cufflinks 1.542       Low
cufflinks 3.035        
cufflinks 4.373        
cufflinks 4.014        
cufflinks 3.755        
cufflinks 3.362        
cufflinks 5.024       High
cufflinks 2.956        
cufflinks 3.247        
cufflinks 1.85        

0 Strain