Gene : Bradi3g44960 B. distachyon v3.1
Defline:  (1 of 1) 3.5.1.53 - N-carbamoylputrescine amidase Genomic Order:  5567
Name:  ? Bradi3g44960 Secondary Identifier:  ? PAC:32822935
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon POLYAMINSYN3-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-43 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g44960 0.5kb upstream 0.5kb upstream 4129 true Bd3: 46645785-46649913 Brachypodium distachyon
Bradi3g44960 0.5kb upstream 0.5kb upstream 500 false Bd3: 46645785-46646284 Brachypodium distachyon
Bradi3g44960 0.5kb downstream 0.5kb downstream 4129 true Bd3: 46646285-46650413 Brachypodium distachyon
Bradi3g44960 0.5kb downstream 0.5kb downstream 500 false Bd3: 46649914-46650413 Brachypodium distachyon
Bradi3g44960 1.0kb upstream 1.0kb upstream 4629 true Bd3: 46645285-46649913 Brachypodium distachyon
Bradi3g44960 1.0kb upstream 1.0kb upstream 1000 false Bd3: 46645285-46646284 Brachypodium distachyon
Bradi3g44960 1.0kb downstream 1.0kb downstream 4629 true Bd3: 46646285-46650913 Brachypodium distachyon
Bradi3g44960 1.0kb downstream 1.0kb downstream 1000 false Bd3: 46649914-46650913 Brachypodium distachyon
Bradi3g44960 2.0kb upstream 2.0kb upstream 5629 true Bd3: 46644285-46649913 Brachypodium distachyon
Bradi3g44960 2.0kb upstream 2.0kb upstream 2000 false Bd3: 46644285-46646284 Brachypodium distachyon
Bradi3g44960 2.0kb downstream 2.0kb downstream 5629 true Bd3: 46646285-46651913 Brachypodium distachyon
Bradi3g44960 2.0kb downstream 2.0kb downstream 2000 false Bd3: 46649914-46651913 Brachypodium distachyon
Bradi3g44960 5.0kb upstream 5.0kb upstream 8629 true Bd3: 46641285-46649913 Brachypodium distachyon
Bradi3g44960 5.0kb upstream 5.0kb upstream 5000 false Bd3: 46641285-46646284 Brachypodium distachyon
Bradi3g44960 5.0kb downstream 5.0kb downstream 8629 true Bd3: 46646285-46654913 Brachypodium distachyon
Bradi3g44960 5.0kb downstream 5.0kb downstream 5000 false Bd3: 46649914-46654913 Brachypodium distachyon
Bradi3g44960 10.0kb upstream 10.0kb upstream 13629 true Bd3: 46636285-46649913 Brachypodium distachyon
Bradi3g44960 10.0kb upstream 10.0kb upstream 10000 false Bd3: 46636285-46646284 Brachypodium distachyon
Bradi3g44960 10.0kb downstream 10.0kb downstream 13629 true Bd3: 46646285-46659913 Brachypodium distachyon
Bradi3g44960 10.0kb downstream 10.0kb downstream 10000 false Bd3: 46649914-46659913 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580285 5269 Grass View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.108     High  
cufflinks 15.291     High  
cufflinks 14.407     High  
cufflinks 17.025     High  
cufflinks 19.874     High  
cufflinks 12.979     High  
cufflinks 14.598     High  
cufflinks 13.242     High  
cufflinks 13.691     High  
cufflinks 14.957     High  
cufflinks 10.471     High Low
cufflinks 14.545     High  
cufflinks 10.333     High Low
cufflinks 8.845     High Low
cufflinks 14.916     High  
cufflinks 13.855     High  
cufflinks 15.609     High  
cufflinks 33.221     High High
cufflinks 26.515     High High
cufflinks 36.562     High High
cufflinks 21.182     High  
cufflinks 14.604     High  
cufflinks 13.42     High  
cufflinks 13.341     High  
cufflinks 15.19     High  
cufflinks 15.769     High  
cufflinks 13.178     High  
cufflinks 14.835     High  
cufflinks 12.703     High  
cufflinks 18.335     High  

0 Strain