Gene : Bradi3g45020 B. distachyon v3.1
Defline:  (1 of 2) PTHR33083:SF5 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  5577
Name:  ? Bradi3g45020 Secondary Identifier:  ? PAC:32814937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g45020 0.5kb upstream 0.5kb upstream 1409 true Bd3: 46723872-46725280 Brachypodium distachyon
Bradi3g45020 0.5kb upstream 0.5kb upstream 500 false Bd3: 46723872-46724371 Brachypodium distachyon
Bradi3g45020 0.5kb downstream 0.5kb downstream 1409 true Bd3: 46724372-46725780 Brachypodium distachyon
Bradi3g45020 0.5kb downstream 0.5kb downstream 500 false Bd3: 46725281-46725780 Brachypodium distachyon
Bradi3g45020 1.0kb upstream 1.0kb upstream 1909 true Bd3: 46723372-46725280 Brachypodium distachyon
Bradi3g45020 1.0kb upstream 1.0kb upstream 1000 false Bd3: 46723372-46724371 Brachypodium distachyon
Bradi3g45020 1.0kb downstream 1.0kb downstream 1909 true Bd3: 46724372-46726280 Brachypodium distachyon
Bradi3g45020 1.0kb downstream 1.0kb downstream 1000 false Bd3: 46725281-46726280 Brachypodium distachyon
Bradi3g45020 2.0kb upstream 2.0kb upstream 2909 true Bd3: 46722372-46725280 Brachypodium distachyon
Bradi3g45020 2.0kb upstream 2.0kb upstream 2000 false Bd3: 46722372-46724371 Brachypodium distachyon
Bradi3g45020 2.0kb downstream 2.0kb downstream 2909 true Bd3: 46724372-46727280 Brachypodium distachyon
Bradi3g45020 2.0kb downstream 2.0kb downstream 2000 false Bd3: 46725281-46727280 Brachypodium distachyon
Bradi3g45020 5.0kb upstream 5.0kb upstream 5909 true Bd3: 46719372-46725280 Brachypodium distachyon
Bradi3g45020 5.0kb upstream 5.0kb upstream 5000 false Bd3: 46719372-46724371 Brachypodium distachyon
Bradi3g45020 5.0kb downstream 5.0kb downstream 5909 true Bd3: 46724372-46730280 Brachypodium distachyon
Bradi3g45020 5.0kb downstream 5.0kb downstream 5000 false Bd3: 46725281-46730280 Brachypodium distachyon
Bradi3g45020 10.0kb upstream 10.0kb upstream 10909 true Bd3: 46714372-46725280 Brachypodium distachyon
Bradi3g45020 10.0kb upstream 10.0kb upstream 10000 false Bd3: 46714372-46724371 Brachypodium distachyon
Bradi3g45020 10.0kb downstream 10.0kb downstream 10909 true Bd3: 46724372-46735280 Brachypodium distachyon
Bradi3g45020 10.0kb downstream 10.0kb downstream 10000 false Bd3: 46725281-46735280 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583224 5269 Grass View MSA
122047516 5273 Angiosperm View MSA
121310750 5274 Embryophyte View MSA
123348161 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.225        
cufflinks 0.177        
cufflinks 0.086     Low  
cufflinks 0.113        
cufflinks 0.149        
cufflinks 0.155        
cufflinks 0.148        
cufflinks 0.048     Low Low
cufflinks 0.194        
cufflinks 0.142        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.195        
cufflinks 0.032     Low Low
cufflinks 0.025     Low Low
cufflinks 0.146        
cufflinks 0.223        
cufflinks 0.262        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.266        
cufflinks 0.206        
cufflinks 0.162        
cufflinks 0.35       High
cufflinks 0.176        
cufflinks 0.177        
cufflinks 0.054     Low Low
cufflinks 0.147        
cufflinks 0.103     Low  
cufflinks 0.283        

0 Strain