Gene : Bradi3g45260 B. distachyon v3.1
Defline:  (1 of 3) 4.1.1.22 - Histidine decarboxylase / L-histidine carboxy-lyase Genomic Order:  5610
Name:  ? Bradi3g45260 Secondary Identifier:  ? PAC:32815466
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g45260 0.5kb upstream 0.5kb upstream 4476 true Bd3: 46997330-47001805 Brachypodium distachyon
Bradi3g45260 0.5kb upstream 0.5kb upstream 500 false Bd3: 46997330-46997829 Brachypodium distachyon
Bradi3g45260 0.5kb downstream 0.5kb downstream 4476 true Bd3: 46997830-47002305 Brachypodium distachyon
Bradi3g45260 0.5kb downstream 0.5kb downstream 500 false Bd3: 47001806-47002305 Brachypodium distachyon
Bradi3g45260 1.0kb upstream 1.0kb upstream 4976 true Bd3: 46996830-47001805 Brachypodium distachyon
Bradi3g45260 1.0kb upstream 1.0kb upstream 1000 false Bd3: 46996830-46997829 Brachypodium distachyon
Bradi3g45260 1.0kb downstream 1.0kb downstream 4976 true Bd3: 46997830-47002805 Brachypodium distachyon
Bradi3g45260 1.0kb downstream 1.0kb downstream 1000 false Bd3: 47001806-47002805 Brachypodium distachyon
Bradi3g45260 2.0kb upstream 2.0kb upstream 5976 true Bd3: 46995830-47001805 Brachypodium distachyon
Bradi3g45260 2.0kb upstream 2.0kb upstream 2000 false Bd3: 46995830-46997829 Brachypodium distachyon
Bradi3g45260 2.0kb downstream 2.0kb downstream 5976 true Bd3: 46997830-47003805 Brachypodium distachyon
Bradi3g45260 2.0kb downstream 2.0kb downstream 2000 false Bd3: 47001806-47003805 Brachypodium distachyon
Bradi3g45260 5.0kb upstream 5.0kb upstream 8976 true Bd3: 46992830-47001805 Brachypodium distachyon
Bradi3g45260 5.0kb upstream 5.0kb upstream 5000 false Bd3: 46992830-46997829 Brachypodium distachyon
Bradi3g45260 5.0kb downstream 5.0kb downstream 8976 true Bd3: 46997830-47006805 Brachypodium distachyon
Bradi3g45260 5.0kb downstream 5.0kb downstream 5000 false Bd3: 47001806-47006805 Brachypodium distachyon
Bradi3g45260 10.0kb upstream 10.0kb upstream 13976 true Bd3: 46987830-47001805 Brachypodium distachyon
Bradi3g45260 10.0kb upstream 10.0kb upstream 10000 false Bd3: 46987830-46997829 Brachypodium distachyon
Bradi3g45260 10.0kb downstream 10.0kb downstream 13976 true Bd3: 46997830-47011805 Brachypodium distachyon
Bradi3g45260 10.0kb downstream 10.0kb downstream 10000 false Bd3: 47001806-47011805 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579920 5269 Grass View MSA
122050239 5273 Angiosperm View MSA
121349588 5274 Embryophyte View MSA
123424735 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.377     High High
cufflinks 42.927     High  
cufflinks 9.158       Low
cufflinks 52.273     High  
cufflinks 213.544     High High
cufflinks 42.742     High  
cufflinks 47.953     High  
cufflinks 39.796     High  
cufflinks 33.513     High  
cufflinks 6.371       Low
cufflinks 35.953     High  
cufflinks 60.207     High  
cufflinks 27.771     High  
cufflinks 29.543     High  
cufflinks 75.535     High  
cufflinks 35.339     High  
cufflinks 38.641     High  
cufflinks 61.459     High  
cufflinks 120.681     High High
cufflinks 110.171     High High
cufflinks 29.209     High  
cufflinks 7.783       Low
cufflinks 56.328     High  
cufflinks 38.581     High  
cufflinks 54.282     High  
cufflinks 15.098     High  
cufflinks 7.543       Low
cufflinks 10.529       Low
cufflinks 8.834       Low
cufflinks 47.173     High  

0 Strain