Gene : Bradi4g30797 B. distachyon v3.1
Defline:  (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1 Genomic Order:  3965
Name:  ? Bradi4g30797 Secondary Identifier:  ? PAC:32785534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g30797 0.5kb upstream 0.5kb upstream 4320 true Bd4: 36476077-36480396 Brachypodium distachyon
Bradi4g30797 0.5kb upstream 0.5kb upstream 500 false Bd4: 36476077-36476576 Brachypodium distachyon
Bradi4g30797 0.5kb downstream 0.5kb downstream 4320 true Bd4: 36476577-36480896 Brachypodium distachyon
Bradi4g30797 0.5kb downstream 0.5kb downstream 500 false Bd4: 36480397-36480896 Brachypodium distachyon
Bradi4g30797 1.0kb upstream 1.0kb upstream 4820 true Bd4: 36475577-36480396 Brachypodium distachyon
Bradi4g30797 1.0kb upstream 1.0kb upstream 1000 false Bd4: 36475577-36476576 Brachypodium distachyon
Bradi4g30797 1.0kb downstream 1.0kb downstream 4820 true Bd4: 36476577-36481396 Brachypodium distachyon
Bradi4g30797 1.0kb downstream 1.0kb downstream 1000 false Bd4: 36480397-36481396 Brachypodium distachyon
Bradi4g30797 2.0kb upstream 2.0kb upstream 5820 true Bd4: 36474577-36480396 Brachypodium distachyon
Bradi4g30797 2.0kb upstream 2.0kb upstream 2000 false Bd4: 36474577-36476576 Brachypodium distachyon
Bradi4g30797 2.0kb downstream 2.0kb downstream 5820 true Bd4: 36476577-36482396 Brachypodium distachyon
Bradi4g30797 2.0kb downstream 2.0kb downstream 2000 false Bd4: 36480397-36482396 Brachypodium distachyon
Bradi4g30797 5.0kb upstream 5.0kb upstream 8820 true Bd4: 36471577-36480396 Brachypodium distachyon
Bradi4g30797 5.0kb upstream 5.0kb upstream 5000 false Bd4: 36471577-36476576 Brachypodium distachyon
Bradi4g30797 5.0kb downstream 5.0kb downstream 8820 true Bd4: 36476577-36485396 Brachypodium distachyon
Bradi4g30797 5.0kb downstream 5.0kb downstream 5000 false Bd4: 36480397-36485396 Brachypodium distachyon
Bradi4g30797 10.0kb upstream 10.0kb upstream 13820 true Bd4: 36466577-36480396 Brachypodium distachyon
Bradi4g30797 10.0kb upstream 10.0kb upstream 10000 false Bd4: 36466577-36476576 Brachypodium distachyon
Bradi4g30797 10.0kb downstream 10.0kb downstream 13820 true Bd4: 36476577-36490396 Brachypodium distachyon
Bradi4g30797 10.0kb downstream 10.0kb downstream 10000 false Bd4: 36480397-36490396 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569815 5269 Grass View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.584        
cufflinks 2.425        
cufflinks 2.305        
cufflinks 2.388        
cufflinks 1.415        
cufflinks 2.153        
cufflinks 2.236        
cufflinks 1.697        
cufflinks 2.323        
cufflinks 2.272        
cufflinks 0.799       Low
cufflinks 1.623        
cufflinks 0.613       Low
cufflinks 0.566       Low
cufflinks 0.951        
cufflinks 2.094        
cufflinks 1.311        
cufflinks 3.521       High
cufflinks 2.625        
cufflinks 0.256       Low
cufflinks 2.881        
cufflinks 2.151        
cufflinks 1.721        
cufflinks 1.981        
cufflinks 2.146        
cufflinks 2.293        
cufflinks 0.467       Low
cufflinks 2.509        
cufflinks 2.154        
cufflinks 2.876        

0 Strain