Gene : Bradi3g46050 B. distachyon v3.1
Defline:  (1 of 1) PTHR22942:SF24 - DNA REPAIR PROTEIN XRCC3 Genomic Order:  5711
Name:  ? Bradi3g46050 Secondary Identifier:  ? PAC:32818678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g46050 0.5kb upstream 0.5kb upstream 4482 true Bd3: 47730045-47734526 Brachypodium distachyon
Bradi3g46050 0.5kb upstream 0.5kb upstream 500 false Bd3: 47730045-47730544 Brachypodium distachyon
Bradi3g46050 0.5kb downstream 0.5kb downstream 4482 true Bd3: 47730545-47735026 Brachypodium distachyon
Bradi3g46050 0.5kb downstream 0.5kb downstream 500 false Bd3: 47734527-47735026 Brachypodium distachyon
Bradi3g46050 1.0kb upstream 1.0kb upstream 4982 true Bd3: 47729545-47734526 Brachypodium distachyon
Bradi3g46050 1.0kb upstream 1.0kb upstream 1000 false Bd3: 47729545-47730544 Brachypodium distachyon
Bradi3g46050 1.0kb downstream 1.0kb downstream 4982 true Bd3: 47730545-47735526 Brachypodium distachyon
Bradi3g46050 1.0kb downstream 1.0kb downstream 1000 false Bd3: 47734527-47735526 Brachypodium distachyon
Bradi3g46050 2.0kb upstream 2.0kb upstream 5982 true Bd3: 47728545-47734526 Brachypodium distachyon
Bradi3g46050 2.0kb upstream 2.0kb upstream 2000 false Bd3: 47728545-47730544 Brachypodium distachyon
Bradi3g46050 2.0kb downstream 2.0kb downstream 5982 true Bd3: 47730545-47736526 Brachypodium distachyon
Bradi3g46050 2.0kb downstream 2.0kb downstream 2000 false Bd3: 47734527-47736526 Brachypodium distachyon
Bradi3g46050 5.0kb upstream 5.0kb upstream 8982 true Bd3: 47725545-47734526 Brachypodium distachyon
Bradi3g46050 5.0kb upstream 5.0kb upstream 5000 false Bd3: 47725545-47730544 Brachypodium distachyon
Bradi3g46050 5.0kb downstream 5.0kb downstream 8982 true Bd3: 47730545-47739526 Brachypodium distachyon
Bradi3g46050 5.0kb downstream 5.0kb downstream 5000 false Bd3: 47734527-47739526 Brachypodium distachyon
Bradi3g46050 10.0kb upstream 10.0kb upstream 13982 true Bd3: 47720545-47734526 Brachypodium distachyon
Bradi3g46050 10.0kb upstream 10.0kb upstream 10000 false Bd3: 47720545-47730544 Brachypodium distachyon
Bradi3g46050 10.0kb downstream 10.0kb downstream 13982 true Bd3: 47730545-47744526 Brachypodium distachyon
Bradi3g46050 10.0kb downstream 10.0kb downstream 10000 false Bd3: 47734527-47744526 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577643 5269 Grass View MSA
122048125 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123        
cufflinks 0.253        
cufflinks 0.475        
cufflinks 0.314        
cufflinks 0.329        
cufflinks 0.227        
cufflinks 0.281        
cufflinks 0.234        
cufflinks 0.228        
cufflinks 0.333        
cufflinks 0.226        
cufflinks 0.128        
cufflinks 0.143        
cufflinks 0.171        
cufflinks 0.146        
cufflinks 0.258        
cufflinks 0.223        
cufflinks 1.391       High
cufflinks 1.749       High
cufflinks 1.731       High
cufflinks 0.224        
cufflinks 0.354        
cufflinks 0.147        
cufflinks 0.147        
cufflinks 0.232        
cufflinks 0.496        
cufflinks 0.345        
cufflinks 0.546        
cufflinks 0.433        
cufflinks 0.166        

0 Strain