Gene : Bradi3g46390 B. distachyon v3.1
Defline:  (1 of 1) PTHR11214//PTHR11214:SF74 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATED Genomic Order:  5756
Name:  ? Bradi3g46390 Secondary Identifier:  ? PAC:32820154
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g46390 0.5kb upstream 0.5kb upstream 6525 true Bd3: 47996510-48003034 Brachypodium distachyon
Bradi3g46390 0.5kb upstream 0.5kb upstream 500 false Bd3: 48002535-48003034 Brachypodium distachyon
Bradi3g46390 0.5kb downstream 0.5kb downstream 6525 true Bd3: 47996010-48002534 Brachypodium distachyon
Bradi3g46390 0.5kb downstream 0.5kb downstream 500 false Bd3: 47996010-47996509 Brachypodium distachyon
Bradi3g46390 1.0kb upstream 1.0kb upstream 7025 true Bd3: 47996510-48003534 Brachypodium distachyon
Bradi3g46390 1.0kb upstream 1.0kb upstream 1000 false Bd3: 48002535-48003534 Brachypodium distachyon
Bradi3g46390 1.0kb downstream 1.0kb downstream 7025 true Bd3: 47995510-48002534 Brachypodium distachyon
Bradi3g46390 1.0kb downstream 1.0kb downstream 1000 false Bd3: 47995510-47996509 Brachypodium distachyon
Bradi3g46390 2.0kb upstream 2.0kb upstream 8025 true Bd3: 47996510-48004534 Brachypodium distachyon
Bradi3g46390 2.0kb upstream 2.0kb upstream 2000 false Bd3: 48002535-48004534 Brachypodium distachyon
Bradi3g46390 2.0kb downstream 2.0kb downstream 8025 true Bd3: 47994510-48002534 Brachypodium distachyon
Bradi3g46390 2.0kb downstream 2.0kb downstream 2000 false Bd3: 47994510-47996509 Brachypodium distachyon
Bradi3g46390 5.0kb upstream 5.0kb upstream 11025 true Bd3: 47996510-48007534 Brachypodium distachyon
Bradi3g46390 5.0kb upstream 5.0kb upstream 5000 false Bd3: 48002535-48007534 Brachypodium distachyon
Bradi3g46390 5.0kb downstream 5.0kb downstream 11025 true Bd3: 47991510-48002534 Brachypodium distachyon
Bradi3g46390 5.0kb downstream 5.0kb downstream 5000 false Bd3: 47991510-47996509 Brachypodium distachyon
Bradi3g46390 10.0kb upstream 10.0kb upstream 16025 true Bd3: 47996510-48012534 Brachypodium distachyon
Bradi3g46390 10.0kb upstream 10.0kb upstream 10000 false Bd3: 48002535-48012534 Brachypodium distachyon
Bradi3g46390 10.0kb downstream 10.0kb downstream 16025 true Bd3: 47986510-48002534 Brachypodium distachyon
Bradi3g46390 10.0kb downstream 10.0kb downstream 10000 false Bd3: 47986510-47996509 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573382 5269 Grass View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.158        
cufflinks 2.242        
cufflinks 2.425        
cufflinks 2.406        
cufflinks 8.044       High
cufflinks 1.977        
cufflinks 1.692        
cufflinks 2.414        
cufflinks 2.119        
cufflinks 2.44        
cufflinks 1.248       Low
cufflinks 2.548        
cufflinks 1.09       Low
cufflinks 0.692       Low
cufflinks 5.713       High
cufflinks 2.231        
cufflinks 2.531        
cufflinks 4.08        
cufflinks 7.899       High
cufflinks 11.358     High High
cufflinks 3.366        
cufflinks 2.432        
cufflinks 2.322        
cufflinks 2.13        
cufflinks 1.863        
cufflinks 2.301        
cufflinks 0.627       Low
cufflinks 2.37        
cufflinks 2.241        
cufflinks 4.273        

0 Strain