Gene : Bradi3g46420 B. distachyon v3.1
Defline:  (1 of 2) PTHR10438:SF229 - THIOREDOXIN-LIKE 4, CHLOROPLASTIC Genomic Order:  5759
Name:  ? Bradi3g46420 Secondary Identifier:  ? PAC:32818111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g46420 0.5kb upstream 0.5kb upstream 2006 true Bd3: 48013214-48015219 Brachypodium distachyon
Bradi3g46420 0.5kb upstream 0.5kb upstream 500 false Bd3: 48014720-48015219 Brachypodium distachyon
Bradi3g46420 0.5kb downstream 0.5kb downstream 2006 true Bd3: 48012714-48014719 Brachypodium distachyon
Bradi3g46420 0.5kb downstream 0.5kb downstream 500 false Bd3: 48012714-48013213 Brachypodium distachyon
Bradi3g46420 1.0kb upstream 1.0kb upstream 2506 true Bd3: 48013214-48015719 Brachypodium distachyon
Bradi3g46420 1.0kb upstream 1.0kb upstream 1000 false Bd3: 48014720-48015719 Brachypodium distachyon
Bradi3g46420 1.0kb downstream 1.0kb downstream 2506 true Bd3: 48012214-48014719 Brachypodium distachyon
Bradi3g46420 1.0kb downstream 1.0kb downstream 1000 false Bd3: 48012214-48013213 Brachypodium distachyon
Bradi3g46420 2.0kb upstream 2.0kb upstream 3506 true Bd3: 48013214-48016719 Brachypodium distachyon
Bradi3g46420 2.0kb upstream 2.0kb upstream 2000 false Bd3: 48014720-48016719 Brachypodium distachyon
Bradi3g46420 2.0kb downstream 2.0kb downstream 3506 true Bd3: 48011214-48014719 Brachypodium distachyon
Bradi3g46420 2.0kb downstream 2.0kb downstream 2000 false Bd3: 48011214-48013213 Brachypodium distachyon
Bradi3g46420 5.0kb upstream 5.0kb upstream 6506 true Bd3: 48013214-48019719 Brachypodium distachyon
Bradi3g46420 5.0kb upstream 5.0kb upstream 5000 false Bd3: 48014720-48019719 Brachypodium distachyon
Bradi3g46420 5.0kb downstream 5.0kb downstream 6506 true Bd3: 48008214-48014719 Brachypodium distachyon
Bradi3g46420 5.0kb downstream 5.0kb downstream 5000 false Bd3: 48008214-48013213 Brachypodium distachyon
Bradi3g46420 10.0kb upstream 10.0kb upstream 11506 true Bd3: 48013214-48024719 Brachypodium distachyon
Bradi3g46420 10.0kb upstream 10.0kb upstream 10000 false Bd3: 48014720-48024719 Brachypodium distachyon
Bradi3g46420 10.0kb downstream 10.0kb downstream 11506 true Bd3: 48003214-48014719 Brachypodium distachyon
Bradi3g46420 10.0kb downstream 10.0kb downstream 10000 false Bd3: 48003214-48013213 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578522 5269 Grass View MSA
122048480 5273 Angiosperm View MSA
121346716 5274 Embryophyte View MSA
123427646 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.097     High  
cufflinks 52.258     High  
cufflinks 40.539     High  
cufflinks 44.548     High  
cufflinks 23.223     High  
cufflinks 45.802     High  
cufflinks 68.0     High High
cufflinks 19.334     High  
cufflinks 31.11     High  
cufflinks 45.011     High  
cufflinks 47.659     High  
cufflinks 21.42     High  
cufflinks 38.683     High  
cufflinks 45.317     High  
cufflinks 24.406     High  
cufflinks 40.191     High  
cufflinks 38.572     High  
cufflinks 3.095       Low
cufflinks 55.342     High  
cufflinks 55.736     High  
cufflinks 40.459     High  
cufflinks 28.906     High  
cufflinks 19.24     High  
cufflinks 31.125     High  
cufflinks 54.884     High  
cufflinks 48.664     High  
cufflinks 54.872     High  
cufflinks 56.131     High  
cufflinks 47.241     High  
cufflinks 27.253     High  

0 Strain