Gene : Bradi4g30550 B. distachyon v3.1
Defline:  (1 of 7) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  3933
Name:  ? Bradi4g30550 Secondary Identifier:  ? PAC:32791724
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g30550 0.5kb upstream 0.5kb upstream 7176 true Bd4: 36200340-36207515 Brachypodium distachyon
Bradi4g30550 0.5kb upstream 0.5kb upstream 500 false Bd4: 36207016-36207515 Brachypodium distachyon
Bradi4g30550 0.5kb downstream 0.5kb downstream 7176 true Bd4: 36199840-36207015 Brachypodium distachyon
Bradi4g30550 0.5kb downstream 0.5kb downstream 500 false Bd4: 36199840-36200339 Brachypodium distachyon
Bradi4g30550 1.0kb upstream 1.0kb upstream 7676 true Bd4: 36200340-36208015 Brachypodium distachyon
Bradi4g30550 1.0kb upstream 1.0kb upstream 1000 false Bd4: 36207016-36208015 Brachypodium distachyon
Bradi4g30550 1.0kb downstream 1.0kb downstream 7676 true Bd4: 36199340-36207015 Brachypodium distachyon
Bradi4g30550 1.0kb downstream 1.0kb downstream 1000 false Bd4: 36199340-36200339 Brachypodium distachyon
Bradi4g30550 2.0kb upstream 2.0kb upstream 8676 true Bd4: 36200340-36209015 Brachypodium distachyon
Bradi4g30550 2.0kb upstream 2.0kb upstream 2000 false Bd4: 36207016-36209015 Brachypodium distachyon
Bradi4g30550 2.0kb downstream 2.0kb downstream 8676 true Bd4: 36198340-36207015 Brachypodium distachyon
Bradi4g30550 2.0kb downstream 2.0kb downstream 2000 false Bd4: 36198340-36200339 Brachypodium distachyon
Bradi4g30550 5.0kb upstream 5.0kb upstream 11676 true Bd4: 36200340-36212015 Brachypodium distachyon
Bradi4g30550 5.0kb upstream 5.0kb upstream 5000 false Bd4: 36207016-36212015 Brachypodium distachyon
Bradi4g30550 5.0kb downstream 5.0kb downstream 11676 true Bd4: 36195340-36207015 Brachypodium distachyon
Bradi4g30550 5.0kb downstream 5.0kb downstream 5000 false Bd4: 36195340-36200339 Brachypodium distachyon
Bradi4g30550 10.0kb upstream 10.0kb upstream 16676 true Bd4: 36200340-36217015 Brachypodium distachyon
Bradi4g30550 10.0kb upstream 10.0kb upstream 10000 false Bd4: 36207016-36217015 Brachypodium distachyon
Bradi4g30550 10.0kb downstream 10.0kb downstream 16676 true Bd4: 36190340-36207015 Brachypodium distachyon
Bradi4g30550 10.0kb downstream 10.0kb downstream 10000 false Bd4: 36190340-36200339 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572936 5269 Grass View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.351        
cufflinks 5.005       High
cufflinks 5.415       High
cufflinks 4.179        
cufflinks 2.056        
cufflinks 4.183        
cufflinks 3.771        
cufflinks 4.193        
cufflinks 4.221        
cufflinks 2.794        
cufflinks 2.406        
cufflinks 5.053       High
cufflinks 1.833       Low
cufflinks 1.787       Low
cufflinks 2.14        
cufflinks 4.145        
cufflinks 2.772        
cufflinks 2.281        
cufflinks 2.051        
cufflinks 1.448       Low
cufflinks 2.546        
cufflinks 4.787       High
cufflinks 4.49        
cufflinks 4.585        
cufflinks 3.952        
cufflinks 4.174        
cufflinks 2.573        
cufflinks 3.807        
cufflinks 4.051        
cufflinks 6.299       High

0 Strain