Gene : Bradi3g52510 B. distachyon v3.1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF412 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  6522
Name:  ? Bradi3g52510 Secondary Identifier:  ? PAC:32822866
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g52510 0.5kb upstream 0.5kb upstream 3125 true Bd3: 53163831-53166955 Brachypodium distachyon
Bradi3g52510 0.5kb upstream 0.5kb upstream 500 false Bd3: 53166456-53166955 Brachypodium distachyon
Bradi3g52510 0.5kb downstream 0.5kb downstream 3125 true Bd3: 53163331-53166455 Brachypodium distachyon
Bradi3g52510 0.5kb downstream 0.5kb downstream 500 false Bd3: 53163331-53163830 Brachypodium distachyon
Bradi3g52510 1.0kb upstream 1.0kb upstream 3625 true Bd3: 53163831-53167455 Brachypodium distachyon
Bradi3g52510 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53166456-53167455 Brachypodium distachyon
Bradi3g52510 1.0kb downstream 1.0kb downstream 3625 true Bd3: 53162831-53166455 Brachypodium distachyon
Bradi3g52510 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53162831-53163830 Brachypodium distachyon
Bradi3g52510 2.0kb upstream 2.0kb upstream 4625 true Bd3: 53163831-53168455 Brachypodium distachyon
Bradi3g52510 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53166456-53168455 Brachypodium distachyon
Bradi3g52510 2.0kb downstream 2.0kb downstream 4625 true Bd3: 53161831-53166455 Brachypodium distachyon
Bradi3g52510 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53161831-53163830 Brachypodium distachyon
Bradi3g52510 5.0kb upstream 5.0kb upstream 7625 true Bd3: 53163831-53171455 Brachypodium distachyon
Bradi3g52510 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53166456-53171455 Brachypodium distachyon
Bradi3g52510 5.0kb downstream 5.0kb downstream 7625 true Bd3: 53158831-53166455 Brachypodium distachyon
Bradi3g52510 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53158831-53163830 Brachypodium distachyon
Bradi3g52510 10.0kb upstream 10.0kb upstream 12625 true Bd3: 53163831-53176455 Brachypodium distachyon
Bradi3g52510 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53166456-53176455 Brachypodium distachyon
Bradi3g52510 10.0kb downstream 10.0kb downstream 12625 true Bd3: 53153831-53166455 Brachypodium distachyon
Bradi3g52510 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53153831-53163830 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574950 5269 Grass View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07     Low Low
cufflinks 0.22        
cufflinks 0.249        
cufflinks 0.218        
cufflinks 0.099        
cufflinks 0.178        
cufflinks 0.276        
cufflinks 0.207        
cufflinks 0.246        
cufflinks 0.295        
cufflinks 0.094       Low
cufflinks 0.158        
cufflinks 0.144        
cufflinks 0.077       Low
cufflinks 0.148        
cufflinks 0.131        
cufflinks 0.159     Low  
cufflinks 0.226        
cufflinks 0.236        
cufflinks 0.061     Low Low
cufflinks 0.239        
cufflinks 0.212        
cufflinks 0.275        
cufflinks 0.242        
cufflinks 0.238        
cufflinks 0.189        
cufflinks 0.079     Low Low
cufflinks 0.289        
cufflinks 0.233        
cufflinks 0.412       High

0 Strain